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AT3G12150.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2048 (InterPro:IPR019149); Has 421 Blast hits to 334 proteins in 155 species: Archae - 2; Bacteria - 147; Metazoa - 215; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XW3SeggNOG:KOG1551EMBL:AY093234EMBL:BT008851
EMBL:CP002686EnsemblPlants:AT3G12150EnsemblPlants:AT3G12150.1entrez:820392
ESTHER:arath-AT3G12150Gene3D:3.40.50.1820GeneID:820392Gramene:AT3G12150.1
hmmpanther:PTHR13617HOGENOM:HOG000003728InterPro:IPR019149InterPro:IPR029058
KEGG:ath:AT3G12150OMA:RERMRNVPfam:PF09752PhylomeDB:Q8RWA3
Proteomes:UP000006548RefSeq:NP_187822.2STRING:3702.AT3G12150.1SUPFAM:SSF53474
TAIR:AT3G12150UniGene:At.43335UniProt:Q8RWA3
Coordinates (TAIR10) chr3:-:3876688..3878621
Molecular Weight (calculated) 40786.70 Da
IEP (calculated) 8.39
GRAVY (calculated) -0.09
Length 363 amino acids
Sequence (TAIR10)
(BLAST)
001: MRTMVTTKLG MLHYVIDHIY GAFMHRTKMT PPFFSRGWGG PNLELLERMV QRLFPLEVQG QNWPPPLVRP VWRTVWETKT ATLREGVFQT PCADELTAAL
101: PPESRTARVA WLVPKNVPPQ KMACVVHLAG TGDHTYDRRL RLGGPLVKQN IATMVLESPF YGQRRPFLQC GARLLCVSDL LLLGRATIEE SRSLIHWLDT
201: EEGFGKMGVC GLSMGGVHAS MVGSLHPTPV ATLPFLSPHS AVVAFCEGIL KYGTAWEALR EELAAQKITM TLDEVRERMR NVLSLTDVTR FPIPKNPDAV
301: IFVAATDDGY IPKHSVLELQ KAWPGSEVRW VTGGHVSSFI LHNDEFRRAI VDGLDRLDWK ESW
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)