suba logo
AT3G11670.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : UDP-Glycosyltransferase superfamily protein
Curator
Summary (TAIR10)
Responsible for the final assembly of galactolipids in photosynthetic membranes. Provides stability to the PS I core complex (e.g. subunits PsaD, PsaE).
Computational
Description (TAIR10)
DIGALACTOSYL DIACYLGLYCEROL DEFICIENT 1 (DGD1); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: digalactosyl diacylglycerol deficient 2 (TAIR:AT4G00550.1); Has 287 Blast hits to 284 proteins in 72 species: Archae - 6; Bacteria - 66; Metazoa - 0; Fungi - 0; Plants - 156; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-1840-MONOMERBioCyc:MetaCyc:AT3G11670-MONOMERCAZy:GT4EC:2.4.1.241eggNOG:ENOG410IJCNeggNOG:ENOG410YBC3EMBL:AC009918
EMBL:AF149841EMBL:AF149842EMBL:AY075649EMBL:AY101521EMBL:CP002686EMBL:KJ138827EnsemblPlants:AT3G11670
EnsemblPlants:AT3G11670.1entrez:820339ExpressionAtlas:Q9S7D1GeneID:820339Genevisible:Q9S7D1GO:GO:0005739GO:GO:0009707
GO:GO:0009809GO:GO:0009867GO:GO:0016757GO:GO:0019375GO:GO:0031408GO:GO:0035250GO:GO:0042550
GO:GO:0046481gramene_pathway:2.4.1.241gramene_pathway:PWY-401hmmpanther:PTHR12526hmmpanther:PTHR12526:SF395HOGENOM:HOG000239858InParanoid:Q9S7D1
InterPro:IPR001296iPTMnet:Q9S7D1KEGG:ath:AT3G11670KO:K09480OMA:TQRFIEYPaxDb:Q9S7D1Pfam:PF00534
Pfam:PF13692Pfam:Q9S7D1PhylomeDB:Q9S7D1PRIDE:Q9S7D1PRO:PR:Q9S7D1ProteinModelPortal:Q9S7D1Proteomes:UP000006548
RefSeq:NP_187773.1RefSeq:NP_850561.1STRING:3702.AT3G11670.1SUPFAM:SSF53756SwissLipids:SLP:000001451TAIR:AT3G11670tair10-symbols:DGD1
UniGene:At.21419UniProt:Q9S7D1UniProt:W8PUU5
Coordinates (TAIR10) chr3:-:3681090..3684495
Molecular Weight (calculated) 91834.00 Da
IEP (calculated) 7.74
GRAVY (calculated) -0.47
Length 808 amino acids
Sequence (TAIR10)
(BLAST)
001: MVKETLIPPS STSMTTGTSS SSSLSMTLSS TNALSFLSKG WREVWDSADA DLQLMRDRAN SVKNLASTFD REIENFLNNS ARSAFPVGSP SASSFSNEIG
101: IMKKLQPKIS EFRRVYSAPE ISRKVMERWG PARAKLGMDL SAIKKAIVSE MELDERQGVL EMSRLRRRRN SDRVRFTEFF AEAERDGEAY FGDWEPIRSL
201: KSRFKEFEKR SSLEILSGFK NSEFVEKLKT SFKSIYKETD EAKDVPPLDV PELLACLVRQ SEPFLDQIGV RKDTCDRIVE SLCKCKSQQL WRLPSAQASD
301: LIENDNHGVD LDMRIASVLQ STGHHYDGGF WTDFVKPETP ENKRHVAIVT TASLPWMTGT AVNPLFRAAY LAKAAKQSVT LVVPWLCESD QELVYPNNLT
401: FSSPEEQESY IRKWLEERIG FKADFKISFY PGKFSKERRS IFPAGDTSQF ISSKDADIAI LEEPEHLNWY YHGKRWTDKF NHVVGIVHTN YLEYIKREKN
501: GALQAFFVNH VNNWVTRAYC DKVLRLSAAT QDLPKSVVCN VHGVNPKFLM IGEKIAEERS RGEQAFSKGA YFLGKMVWAK GYRELIDLMA KHKSELGSFN
601: LDVYGNGEDA VEVQRAAKKH DLNLNFLKGR DHADDALHKY KVFINPSISD VLCTATAEAL AMGKFVVCAD HPSNEFFRSF PNCLTYKTSE DFVSKVQEAM
701: TKEPLPLTPE QMYNLSWEAA TQRFMEYSDL DKILNNGEGG RKMRKSRSVP SFNEVVDGGL AFSHYVLTGN DFLRLCTGAT PRTKDYDNQH CKDLNLVPPH
801: VHKPIFGW
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)