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AT3G11490.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.731
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : rac GTPase activating protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
rac GTPase activating protein; FUNCTIONS IN: Rac GTPase activator activity; INVOLVED IN: signal transduction; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding (InterPro:IPR000095), Rho GTPase activation protein (InterPro:IPR008936), RhoGAP (InterPro:IPR000198); BEST Arabidopsis thaliana protein match is: Rho GTPase activating protein with PAK-box/P21-Rho-binding domain (TAIR:AT5G22400.1); Has 4440 Blast hits to 4438 proteins in 184 species: Archae - 0; Bacteria - 0; Metazoa - 3286; Fungi - 515; Plants - 197; Viruses - 0; Other Eukaryotes - 442 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XRR2eggNOG:KOG4270EMBL:AC008153EMBL:CP002686
EnsemblPlants:AT3G11490EnsemblPlants:AT3G11490.1entrez:820322Gene3D:1.10.555.10
Gene3D:3.90.810.10GeneID:820322Genevisible:Q9CAX8GO:GO:0005096
GO:GO:0007165GO:GO:0034059Gramene:AT3G11490.1hmmpanther:PTHR23177
hmmpanther:PTHR23177:SF24HOGENOM:HOG000238683InParanoid:Q9CAX8InterPro:IPR000095
InterPro:IPR000198InterPro:IPR008936iPTMnet:Q9CAX8KEGG:ath:AT3G11490
ncoils:CoilOMA:IRRSVIGPaxDb:Q9CAX8Pfam:PF00620
Pfam:PF00786Pfam:Q9CAX8Pfscan:PS50108Pfscan:PS50238
Pfscan:PS51257PhylomeDB:Q9CAX8PRIDE:Q9CAX8PRO:PR:Q9CAX8
PROSITE:PS50108PROSITE:PS50238ProteinModelPortal:Q9CAX8Proteomes:UP000006548
RefSeq:NP_187756.1SMART:SM00285SMART:SM00324SMR:Q9CAX8
STRING:3702.AT3G11490.1SUPFAM:SSF48350TAIR:AT3G11490UniGene:At.53271
UniProt:Q9CAX8
Coordinates (TAIR10) chr3:-:3617523..3619567
Molecular Weight (calculated) 48752.60 Da
IEP (calculated) 4.55
GRAVY (calculated) -0.46
Length 435 amino acids
Sequence (TAIR10)
(BLAST)
001: MAKVLKSSQS CHFPSPSSSS STSCGGGNDG SNRDPHSPFN ISRREEEEEE EERSEKERER FELSSALEIL VSAIRRSVIG GCVGEEDLCS MEIGVPTDVR
101: HVAHVTFDRF HGFLGLPVEF EPEVPRRAPS ASATVFGVST ESMQLSYDTR GNIVPTILLM MQSHLYSRGG LRVEGIFRIN GENGQEEYIR EELNKGIIPD
201: NIDVHCLASL IKAWFRELPS GVLDSLSPEQ VMESESEDEC VELVRLLPST EASLLDWAIN LMADVVEMEQ LNKMNARNIA MVFAPNMTQM LDPLTALMYA
301: VQVMNFLKTL IVKTLKDRKE SRDKLVPASN PSPRDHNGDQ SSSRQLLHLM KANKEETLDN FEAEMKDKEE SADEEEEECA ESVELVDIKK SSLVNNSSGG
401: FGQKHIGWEE QRTMSKASSI VGRVNYRVEL FEAWR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)