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AT3G11410.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : protein phosphatase 2CA
Curator
Summary (TAIR10)
Encodes protein phosphatase 2C. Negative regulator of ABA signalling. Expressed in seeds during germination. mRNA up-regulated by drought and ABA.
Computational
Description (TAIR10)
protein phosphatase 2CA (PP2CA); FUNCTIONS IN: protein binding, protein serine/threonine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: in 6 processes; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: highly ABA-induced PP2C gene 2 (TAIR:AT1G07430.1); Has 6894 Blast hits to 6854 proteins in 510 species: Archae - 4; Bacteria - 413; Metazoa - 1689; Fungi - 773; Plants - 2747; Viruses - 7; Other Eukaryotes - 1261 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G11410-MONOMERBioGrid:5648DIP:DIP-40197NEC:3.1.3.16eggNOG:COG0631eggNOG:KOG0698EMBL:AC008153
EMBL:AY074368EMBL:AY091391EMBL:CP002686EMBL:D38109EnsemblPlants:AT3G11410EnsemblPlants:AT3G11410.1entrez:820314
Gene3D:3.60.40.10GeneID:820314Genevisible:P49598GO:GO:0004721GO:GO:0004722GO:GO:0005634GO:GO:0005829
GO:GO:0009409GO:GO:0009414GO:GO:0009737GO:GO:0009738GO:GO:0009788GO:GO:0010119GO:GO:0010360
GO:GO:0019901GO:GO:0046872Gramene:AT3G11410.1hmmpanther:PTHR13832hmmpanther:PTHR13832:SF219HOGENOM:HOG000233896InParanoid:P49598
IntAct:P49598InterPro:IPR000222InterPro:IPR001932InterPro:IPR015655iPTMnet:P49598KEGG:ath:AT3G11410KO:K14497
MINT:MINT-8390822OMA:ASPARECPANTHER:PTHR13832PaxDb:P49598PDB:4N0GPDBsum:4N0GPfam:P49598
Pfam:PF00481Pfscan:PS51746PhylomeDB:P49598PIR:S55457PRIDE:P49598PRO:PR:P49598PROSITE:PS01032
PROSITE:PS51746ProteinModelPortal:P49598Proteomes:UP000006548RefSeq:NP_187748.1scanprosite:PS01032SMART:SM00331SMART:SM00332
SMR:P49598STRING:3702.AT3G11410.1SUPFAM:SSF81606TAIR:AT3G11410tair10-symbols:AHG3tair10-symbols:ATPP2CAtair10-symbols:PP2CA
UniGene:At.20739UniProt:P49598
Coordinates (TAIR10) chr3:-:3584181..3585649
Molecular Weight (calculated) 43352.40 Da
IEP (calculated) 6.31
GRAVY (calculated) -0.30
Length 399 amino acids
Sequence (TAIR10)
(BLAST)
001: MAGICCGVVG ETEPAAPVDS TSRASLRRRL DLLPSIKIVA DSAVAPPLEN CRKRQKRETV VLSTLPGNLD LDSNVRSENK KARSAVTNSN SVTEAESFFS
101: DVPKIGTTSV CGRRRDMEDA VSIHPSFLQR NSENHHFYGV FDGHGCSHVA EKCRERLHDI VKKEVEVMAS DEWTETMVKS FQKMDKEVSQ RECNLVVNGA
201: TRSMKNSCRC ELQSPQCDAV GSTAVVSVVT PEKIIVSNCG DSRAVLCRNG VAIPLSVDHK PDRPDELIRI QQAGGRVIYW DGARVLGVLA MSRAIGDNYL
301: KPYVIPDPEV TVTDRTDEDE CLILASDGLW DVVPNETACG VARMCLRGAG AGDDSDAAHN ACSDAALLLT KLALARQSSD NVSVVVVDLR KRRNNQASS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)