AT3G11340.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.509 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : UDP-Glycosyltransferase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, LP.02 two leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 76C1 (TAIR:AT5G05870.1); Has 7583 Blast hits to 7530 proteins in 440 species: Archae - 0; Bacteria - 352; Metazoa - 2017; Fungi - 25; Plants - 5047; Viruses - 86; Other Eukaryotes - 56 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:3556728..3558149 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 50708.10 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.79 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.06 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 447 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: METRETKPVI FLFPFPLQGH LNPMFQLANI FFNRGFSITV IHTEFNSPNS SNFPHFTFVS IPDSLSEPES YPDVIEILHD LNSKCVAPFG DCLKKLISEE 101: PTAACVIVDA LWYFTHDLTE KFNFPRIVLR TVNLSAFVAF SKFHVLREKG YLSLQETKAD SPVPELPYLR MKDLPWFQTE DPRSGDKLQI GVMKSLKSSS 201: GIIFNAIEDL ETDQLDEARI EFPVPLFCIG PFHRYVSASS SSLLAHDMTC LSWLDKQATN SVIYASLGSI ASIDESEFLE IAWGLRNSNQ PFLWVVRPGL 301: IHGKEWIEIL PKGFIENLEG RGKIVKWAPQ PEVLAHRATG GFLTHCGWNS TLEGICEAIP MICRPSFGDQ RVNARYINDV WKIGLHLENK VERLVIENAV 401: RTLMTSSEGE EIRKRIMPMK ETVEQCLKLG GSSFRNLENL IAYILSF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)