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AT3G10940.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : dual specificity protein phosphatase (DsPTP1) family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
dual specificity protein phosphatase (DsPTP1) family protein; FUNCTIONS IN: phosphatase activity, protein tyrosine/serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation, dephosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422); BEST Arabidopsis thaliana protein match is: dual specificity protein phosphatase (DsPTP1) family protein (TAIR:AT3G52180.2); Has 897 Blast hits to 897 proteins in 122 species: Archae - 6; Bacteria - 12; Metazoa - 607; Fungi - 18; Plants - 142; Viruses - 11; Other Eukaryotes - 101 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G10940-MONOMEREC:3.1.3.-eggNOG:COG2453eggNOG:KOG1716EMBL:AC009991EMBL:AK226225EMBL:AY087019
EMBL:BT024510EMBL:CP002686EnsemblPlants:AT3G10940EnsemblPlants:AT3G10940.1entrez:820265Gene3D:3.90.190.10GeneID:820265
Genevisible:Q9SRK5GO:GO:0005983GO:GO:0008138GO:GO:0009507GO:GO:0019203GO:GO:0046838GO:GO:0050308
GO:GO:2001070Gramene:AT3G10940.1hmmpanther:PTHR10159hmmpanther:PTHR10159:SF326HOGENOM:HOG000243950InParanoid:Q9SRK5InterPro:IPR000340
InterPro:IPR000387InterPro:IPR020422InterPro:IPR024950InterPro:IPR029021KEGG:ath:AT3G10940OMA:IRHMRRPPANTHER:PTHR10159
PaxDb:Q9SRK5PDB:4KYQPDB:4KYRPDBsum:4KYQPDBsum:4KYRPfam:PF00782Pfam:Q9SRK5
Pfscan:PS50054Pfscan:PS50056PhylomeDB:Q9SRK5PRIDE:Q9SRK5PRO:PR:Q9SRK5PROSITE:PS50054PROSITE:PS50056
ProteinModelPortal:Q9SRK5Proteomes:UP000006548RefSeq:NP_566383.1SMART:SM00195SMR:Q9SRK5STRING:3702.AT3G10940.1SUPFAM:SSF52799
TAIR:AT3G10940UniGene:At.39834UniProt:Q9SRK5
Coordinates (TAIR10) chr3:-:3422259..3423394
Molecular Weight (calculated) 32089.20 Da
IEP (calculated) 8.63
GRAVY (calculated) -0.60
Length 282 amino acids
Sequence (TAIR10)
(BLAST)
001: MSVIGSKSCI FSVARYTREN EKSSCFTSIN KKSSLDLRFP RNLAGVSCKF SGENPGTNGV SLSSKNKMED YNTAMKRLMR SPYEYHHDLG MNYTLIRDEL
101: IVGSQPQKPE DIDHLKQEQN VAYILNLQQD KDIEYWGIDL DSIVRRCKEL GIRHMRRPAK DFDPLSLRSQ LPKAVSSLEW AVSEGKGRVY VHCSAGLGRA
201: PGVSIAYMYW FCDMNLNTAY DTLVSKRPCG PNKGAIRGAT YDLAKNDPWK EPFESLPENA FEDIADWERK LIQERVRALR GT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)