AT3G10600.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.956 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cationic amino acid transporter 7 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cationic amino acid transporter 7 (CAT7); FUNCTIONS IN: cationic amino acid transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.02 two leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 6 (TAIR:AT5G04770.1); Has 33338 Blast hits to 33265 proteins in 2295 species: Archae - 501; Bacteria - 26895; Metazoa - 1960; Fungi - 2417; Plants - 365; Viruses - 0; Other Eukaryotes - 1200 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:3313969..3317162 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 63705.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.77 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.63 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 584 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEAQYRNHDG DTSFSSLRVY LNSLSDTPSR FSRRAVSVST SYDEMSRVRA VSGEQMRRTL RWYDLIGLGI GGMIGAGVFV TTGRASRLYA GPSIVVSYAI 101: AGLCALLSAF CYTEFAVHLP VAGGAFSYIR ITFGEFPAFI TGANLIMDYV LSNAAVSRGF TAYLGSAFGI STSEWRFIVS GLPNGFNEID PIAVIVVLAV 201: TFVICYSTRE SSKVNMVLTA LHIAFIVFVI VMGFSKGDVK NLTRPDNPEN PSGFFPFGVS GVFNGAAMVY LSYIGYDAVS TMAEEVKDPV KDIPMGISGS 301: VAIVIVLYCL MAISMSMLLP YDLIDAEAPY SAAFSKSEGW EWVTRVVGIG ASFGILTSLI VAMLGQARYM CVIGRSRVVP IWFAKVHPKT STPVNASAFL 401: GIFTAVLALF TDLNVLLNLV SIGTLFVFYM VANAVIFRRY VTVGYTEPWP TLSFLCLFSI TSILFTLVWQ LAPSGPPKWF ILGASTVTAI AIVQIFHCVV 501: PQARIPEFWG VPLMPWTPCV SIFLNIFLLG SLDAPSYIRF GFFSGLVVLV YVFYSVHASY DAEGDGSLDF KDVESLERIN RVLS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)