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AT3G10600.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.888
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cationic amino acid transporter 7
Curator
Summary (TAIR10)
Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters.
Computational
Description (TAIR10)
cationic amino acid transporter 7 (CAT7); FUNCTIONS IN: cationic amino acid transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.02 two leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 6 (TAIR:AT5G04770.1); Has 33338 Blast hits to 33265 proteins in 2295 species: Archae - 501; Bacteria - 26895; Metazoa - 1960; Fungi - 2417; Plants - 365; Viruses - 0; Other Eukaryotes - 1200 (source: NCBI BLink).
Protein Annotations
BioGrid:5563eggNOG:COG0531eggNOG:KOG1286EMBL:AC011560EMBL:AC013428EMBL:CP002686EnsemblPlants:AT3G10600
EnsemblPlants:AT3G10600.1entrez:820229GeneID:820229Genevisible:Q9SQZ0GO:GO:0015179GO:GO:0015297GO:GO:0015807
GO:GO:0016021GO:GO:0031969GO:GO:1902475Gramene:AT3G10600.1hmmpanther:PTHR11785hmmpanther:PTHR11785:SF331HOGENOM:HOG000237636
InParanoid:Q9SQZ0InterPro:IPR002293InterPro:IPR029485iPTMnet:Q9SQZ0KEGG:ath:AT3G10600OMA:CLMAISMPANTHER:PTHR11785
PaxDb:Q9SQZ0Pfam:PF13520Pfam:PF13906Pfam:Q9SQZ0PhylomeDB:Q9SQZ0PRIDE:Q9SQZ0PRO:PR:Q9SQZ0
ProteinModelPortal:Q9SQZ0Proteomes:UP000006548RefSeq:NP_187671.1SMR:Q9SQZ0STRING:3702.AT3G10600.1TAIR:AT3G10600tair10-symbols:CAT7
TMHMM:TMhelixUniGene:At.53252UniProt:Q9SQZ0
Coordinates (TAIR10) chr3:+:3313969..3317162
Molecular Weight (calculated) 63705.80 Da
IEP (calculated) 6.77
GRAVY (calculated) 0.63
Length 584 amino acids
Sequence (TAIR10)
(BLAST)
001: MEAQYRNHDG DTSFSSLRVY LNSLSDTPSR FSRRAVSVST SYDEMSRVRA VSGEQMRRTL RWYDLIGLGI GGMIGAGVFV TTGRASRLYA GPSIVVSYAI
101: AGLCALLSAF CYTEFAVHLP VAGGAFSYIR ITFGEFPAFI TGANLIMDYV LSNAAVSRGF TAYLGSAFGI STSEWRFIVS GLPNGFNEID PIAVIVVLAV
201: TFVICYSTRE SSKVNMVLTA LHIAFIVFVI VMGFSKGDVK NLTRPDNPEN PSGFFPFGVS GVFNGAAMVY LSYIGYDAVS TMAEEVKDPV KDIPMGISGS
301: VAIVIVLYCL MAISMSMLLP YDLIDAEAPY SAAFSKSEGW EWVTRVVGIG ASFGILTSLI VAMLGQARYM CVIGRSRVVP IWFAKVHPKT STPVNASAFL
401: GIFTAVLALF TDLNVLLNLV SIGTLFVFYM VANAVIFRRY VTVGYTEPWP TLSFLCLFSI TSILFTLVWQ LAPSGPPKWF ILGASTVTAI AIVQIFHCVV
501: PQARIPEFWG VPLMPWTPCV SIFLNIFLLG SLDAPSYIRF GFFSGLVVLV YVFYSVHASY DAEGDGSLDF KDVESLERIN RVLS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)