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AT3G10560.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 0.988
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : Cytochrome P450 superfamily protein
Curator
Summary (TAIR10)
member of CYP77A
Computational
Description (TAIR10)
UNFERTILIZED EMBRYO SAC 9 (UNE9); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: double fertilization forming a zygote and endosperm, pollen tube development; LOCATED IN: endomembrane system; EXPRESSED IN: central cell, embryo, sperm cell, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 77, subfamily A, polypeptide 9 (TAIR:AT5G04630.1); Has 33598 Blast hits to 33350 proteins in 1733 species: Archae - 49; Bacteria - 4240; Metazoa - 11965; Fungi - 6662; Plants - 9437; Viruses - 6; Other Eukaryotes - 1239 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G10560-MONOMEReggNOG:COG2124eggNOG:KOG0156EMBL:AC011560
EMBL:AC013428EMBL:CP002686EnsemblPlants:AT3G10560EnsemblPlants:AT3G10560.1
entrez:820221Gene3D:1.10.630.10GeneID:820221GO:GO:0005506
GO:GO:0009567GO:GO:0010143GO:GO:0016020GO:GO:0016021
GO:GO:0016709GO:GO:0020037GO:GO:0044550GO:GO:0048868
GO:GO:0052722Gramene:AT3G10560.1hmmpanther:PTHR24298hmmpanther:PTHR24298:SF47
HOGENOM:HOG000218630InterPro:IPR001128InterPro:IPR002401InterPro:IPR017972
KEGG:ath:AT3G10560OMA:NIEFYLPPfam:PF00067PhylomeDB:Q9SQY6
PRINTS:PR00385PRINTS:PR00463PROSITE:PS00086Proteomes:UP000006548
RefSeq:NP_187667.1scanprosite:PS00086SMR:Q9SQY6STRING:3702.AT3G10560.1
SUPFAM:SSF48264TAIR:AT3G10560tair10-symbols:CYP77A7tair10-symbols:UNE9
TMHMM:TMhelixUniGene:At.39906UniProt:Q9SQY6
Coordinates (TAIR10) chr3:+:3299939..3301483
Molecular Weight (calculated) 58051.60 Da
IEP (calculated) 7.02
GRAVY (calculated) -0.05
Length 514 amino acids
Sequence (TAIR10)
(BLAST)
001: MSFLSFSPIS LDLLSSNVFL TILAIIISGL LKTITYRKHN SNHLNLPPGP PGWPVIGNLF QFTRSGKQFF EYVEDLVKIY GPILTLRLGT RTMIIISDAS
101: LAHEALIERG AQFATRPVET PTRKIFSSSE ITVHSAMYGP VWRSLRRNMV QNMLSSNRLK EFGSVRKSAM DKLIERIKSE ARDNDGLVWV LQNSRYAAFC
201: VLLDICFGVE MEEESIEKMD QLMTAILNAV DPKLHDYLPI LTPFNYNERN RALKLRRELV DFVVGFIEKR RKAIRTATVS SFSYLDTLFD LRIIEGSETT
301: PSDEDLVTLC SEFLNAGTDT TGAAIEWGIA ELIANPEIQS RLYDEIKSTV GDRAVDERDV DKMVLLQAVV KEILRRHPPT YFTLSHGVTE PTTLSGYNIP
401: VGVNIEFYLP GISEDPKIWS EPKKFDPDRF LSGREDADIT GVAGVKMMPF GVGRRICPGM GMATVHVHLM IARMVQEFEW LAYPPQSEMD FAGKLVFAVV
501: MKKPLRAMVR PRVQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)