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AT3G10550.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.992
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Myotubularin-like phosphatases II superfamily
Curator
Summary (TAIR10)
Has 3'-phosphatase activity against both phosphatidylinositol-3,5-bisphosphate (PtdIns3,5P2) and Phosphatidylinositol-3-phosphate (PtdIns3P). The in vitro activity was higher with PtdIns3,5P2 than with PtdIns3P.
Computational
Description (TAIR10)
Myotubularin-like phosphatases II superfamily; FUNCTIONS IN: phosphatidylinositol-3-phosphatase activity, phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity; INVOLVED IN: dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Myotubularin phosphatase (InterPro:IPR017906), GRAM (InterPro:IPR004182), Myotubularin-related (InterPro:IPR010569); BEST Arabidopsis thaliana protein match is: Myotubularin-like phosphatases II superfamily (TAIR:AT5G04540.1); Has 1697 Blast hits to 1550 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 1273; Fungi - 128; Plants - 40; Viruses - 0; Other Eukaryotes - 256 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G10550-MONOMEREC:3.1.3.64EC:3.1.3.95eggNOG:ENOG410XPTU
eggNOG:KOG4471EMBL:AC011560EMBL:AC013428EMBL:BT004136
EMBL:CP002686EnsemblPlants:AT3G10550EnsemblPlants:AT3G10550.1entrez:820220
Gene3D:2.30.29.30GeneID:820220Genevisible:F4J3T8GO:GO:0004438
GO:GO:0004725GO:GO:0006629GO:GO:0010008GO:GO:0031410
GO:GO:0035556GO:GO:0042631GO:GO:0052629GO:GO:2000070
hmmpanther:PTHR10807hmmpanther:PTHR10807:SF8HOGENOM:HOG000029822InParanoid:F4J3T8
InterPro:IPR004182InterPro:IPR010569InterPro:IPR011993InterPro:IPR016130
InterPro:IPR029021InterPro:IPR030564KEGG:ath:AT3G10550KO:K18081
ncoils:CoilOMA:HICESLCPANTHER:PTHR10807PaxDb:F4J3T8
Pfam:F4J3T8Pfam:PF06602Pfscan:PS51339PRIDE:F4J3T8
PRO:PR:F4J3T8PROSITE:PS00383PROSITE:PS51339ProteinModelPortal:F4J3T8
Proteomes:UP000006548Reactome:R-ATH-1660499Reactome:R-ATH-1660516Reactome:R-ATH-1660517
RefSeq:NP_187666.5scanprosite:PS00383SMART:SM00568SMR:F4J3T8
STRING:3702.AT3G10550.1SUPFAM:SSF50729SUPFAM:SSF52799TAIR:AT3G10550
tair10-symbols:AtMTM1tair10-symbols:MTM1UniGene:At.46683UniProt:F4J3T8
Coordinates (TAIR10) chr3:-:3293210..3298452
Molecular Weight (calculated) 93383.00 Da
IEP (calculated) 8.08
GRAVY (calculated) -0.28
Length 840 amino acids
Sequence (TAIR10)
(BLAST)
001: MTPPRPPSGR VRSLRDYSSE SEKMDGTGSW DTLEWTKLDS TSGSGSFSNL SCLLESERVI VEGYGVVLIN TDEAGTLLVT NFRILFLSEG TRKVIPLGTI
101: PLATIEKFNK MVLKVQSSPR QSDKIPPRRL LQVTGKDMRI IVYGFRPRTK QRRNVFDALL KCTKPERVWD LYTFACGPSK FGNANPKERL LNEYFRLLGK
201: SSIRASMDMI EDGAFTLSNE LWRISDLNSN YNLCQTYPFA FMIPKSISDA ELLQACSFRA RCRLPVITWC QPGSGAVIAR SSQPLVGLMM NMRSNLDEKL
301: VAAFCSQLPG AKGERRKLYI ADARPRKNAL ANGAMGGGSE SSSNYFQSEI VFFGIDNIHA MRESFSRVRD YLDMHGTTSS DGRSSFLRHG GWTWGGGNLS
401: SMSASVSLLG DSGWLIHIQS VLAGAAWIAA RVAMESASVL VHCSDGWDRT TQLVSLACLL LDPYYRTFAG FQALVEKDWL AFGHPFSDRV GMPNISGSGN
501: FDFPRQSSSA GSFPSSPVRQ SSGSAASQSS SSSHGHNNYS PIFMQWIDSV SQLMRMYPCA FEFSPTFLVD FMDCLLSCRF GNFLCNSEKE REQCGIADAC
601: GCLWAYLTDL RSFSATSHVH CNPFYDPLKY DGPLLPPAAS LAPTLWPQFH LRWACPEEAK AADIGVQCRA MTVKYSEMQK EKEAAERRVD EISFAMESLS
701: AELLRERHLS WVARESANRA TKEYAALTRA VQSLGCKINF TTSDVEDDPR SSLENNPRRR NRHGNNSDVS VSISLMPEEN TSGNPKGRVC EALCPLRTRE
801: GVCRWPEVGC AHVGSQFVGL KANFDAFDRL AIYDSYFQPK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)