AT3G10350.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: cellular metal ion homeostasis, anion transport; LOCATED IN: chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, anion-transporting (InterPro:IPR003348); BEST Arabidopsis thaliana protein match is: Anion-transporting ATPase (TAIR:AT5G60730.1); Has 2945 Blast hits to 2509 proteins in 789 species: Archae - 176; Bacteria - 2046; Metazoa - 144; Fungi - 222; Plants - 103; Viruses - 0; Other Eukaryotes - 254 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:3208310..3210678 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 44756.40 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.96 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.06 | ||||||||||||||||||||||||||||||||
| Length | 411 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MATLSSYLLS SPPLCKSRFS ATSLVSGIDF ISFSPRTTLS SSSTVLPAIL SLSVKHNRRR NSLQVKSVAS PTETISEFDE MVSGTKRKYY MLGGKGGVGK 101: TSCAASLAVR FANNGHPTLV VSTDPAHSLS DSFAQDLTGG MLVPVEGPEA PLFALEINPE KAREEFRSAS QMNGGTGVKD FMDGMGLGML VEQLGELKLG 201: ELLDTPPPGL DEAIAISKVI QFLESPEYNM FTRIVFDTAP TGHTLRLLSL PDFLDASIGK ILKLRQKITS ATSAIKSVFG KEEKGPDAAD KLEKLRERMV 301: KVRELFRDTE STEFVIVTIP TVMAVSESSR LSASLKKESV PVKRLIVNQL LPPSSSDCKF CSIKRKDQMR ALDMIREDSE LSALTLMEAP LVDMEIRGVP 401: ALRFLGDIIW K |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)