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AT3G10180.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G59540.1); Has 155291 Blast hits to 84008 proteins in 3275 species: Archae - 1854; Bacteria - 27736; Metazoa - 67441; Fungi - 13681; Plants - 10077; Viruses - 530; Other Eukaryotes - 33972 (source: NCBI BLink).
Protein Annotations
eggNOG:COG5059eggNOG:KOG0242EMBL:CP002686EnsemblPlants:AT3G10180EnsemblPlants:AT3G10180.1entrez:820180Gene3D:3.40.850.10
GeneID:820180GO:GO:0003777GO:GO:0005524GO:GO:0005874GO:GO:0007018Gramene:AT3G10180.1hmmpanther:PTHR24115
hmmpanther:PTHR24115:SF535InParanoid:F4J2K4InterPro:IPR001752InterPro:IPR019821InterPro:IPR027417InterPro:IPR027640iPTMnet:F4J2K4
KEGG:ath:AT3G10180KO:K11498ncoils:CoilOMA:RIFGEECPANTHER:PTHR24115PaxDb:F4J2K4Pfam:PF00225
Pfscan:PS50067PRIDE:F4J2K4PRINTS:PR00380PROSITE:PS00411PROSITE:PS50067ProteinModelPortal:F4J2K4Proteomes:UP000006548
Reactome:R-ATH-983189RefSeq:NP_187629.3scanprosite:PS00411SMART:SM00129SMR:F4J2K4STRING:3702.AT3G10180.1SUPFAM:SSF52540
TAIR:AT3G10180UniGene:At.75289UniProt:F4J2K4
Coordinates (TAIR10) chr3:-:3146393..3154644
Molecular Weight (calculated) 144766.00 Da
IEP (calculated) 5.08
GRAVY (calculated) -0.66
Length 1273 amino acids
Sequence (TAIR10)
(BLAST)
0001: MERIHVSVRA RPLSSEDAKT SPWKISSDSI FMPNHSSLAF EFDRIFREDC KTVQVYEART KEIVSAAVRG FNGTVFAYGQ TNSGKTHTMR GSPIEPGVIP
0101: LAVHDLFDTI YQDASREFLL RMSYLEIYNE DINDLLAPEH RKLQIHENLE KGIFVAGLRE EIVASPQQVL EMMEFGESHR HIGETNMNLY SSRSHTIFRM
0201: IIESRQKMQD EGVGNSCDAV RVSVLNLVDL AGSERAAKTG AEGVRLKEGS HINKSLMTLG TVIKKLSEGV ETQGGHVPYR DSKLTRILQP ALGGNANTAI
0301: ICNITLAPIH ADETKSSLQF ASRALRVTNC AHVNEILTDA ALLKRQKKEI EELRSKLKTS HSDHSEEEIL NLRNTLLKSE LERERIALEL EEEKKAQAQR
0401: ERVLQEQAKK IKNLSSMVLL SNRDEKREQD HFKKGKRRDT WCIGKLSRDS TSEDQSNVLS RGSSLESARS ERETGPLLPF SELVNEPLYN INEEDEDSIE
0501: GTLEDSVLPD PCALVNVTSR KKPSIKQKNP VVVENELDRI QREYEALLLQ YETERIISEI QIECLKVKLG EDGLSGDAKC KQSEVVGNVH CEEHVVNLRD
0601: PEAILLIKQL QEKINMLELE KSSSNRNLDD LVMVATEQNI CAREKFAEIQ EEIHAAREEA QVAREQLVSK ESEVIDVINE NFNSLVNVAT EIEVLESEFQ
0701: KYKASVETIS SVMNEGLQDF AFFSPLIHDF TLFVRQSSEQ HDSLINSYQT VQSSLKKKVL DVENEKLLLQ EQCAGLQSQI EELNQEAQKH ETSLKMLSEH
0801: HESERSDLLS HIECLEKDIG SLSSSSLAKE KENLRKDFEK TKTKLKDTES KLKNSMQDKT KLEAEKASAE RELKRLHSQK ALLERDISKQ ESFAGKRRDS
0901: LLVERSANQS LQEEFKQLEV LAFEMETTIA SLEEELAAER GEKEEALCRN DGLGSEITDL TEKLEHSNTK LEHLQNDVTE LKTRLEVSSS DQQQLETNVK
1001: QLLEEKEELA MHLANSLLEM EEEKAIWSSK EKALTEAVEE KIRLYKNIQI ESLSKEMSEE KKELESCRLE CVTLADRLRC SEENAKQDKE SSLEKSLEID
1101: RLGDELRSAD AVSKQSQEVL KSDIDILKSE VQHACKMSDT FQREMDYVTS ERQGLLARIE ELSKELASSN RWQIENAKNP IQDLTLKISS QETNLHKDAA
1201: AENKEKAKLK MRLRGMQARL DAISLRYKQS VQESELMNRK FKEASAKLKE KLASKALEVL DLKKQLSASS RTM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)