AT3G10150.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:extracellular 0.974 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : purple acid phosphatase 16 | ||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
purple acid phosphatase 16 (PAP16); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Phosphoesterase At2g46880 (InterPro:IPR011230); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 28 (TAIR:AT5G57140.1); Has 563 Blast hits to 562 proteins in 197 species: Archae - 0; Bacteria - 224; Metazoa - 0; Fungi - 196; Plants - 110; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr3:-:3137502..3139056 | ||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 41164.10 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 6.51 | ||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.17 | ||||||||||||||||||||||||||||||||||||||||||||||||
Length | 367 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MKKPSLFQII IIVLSIPTTT GRTVGNLRVR EGSPFKIAIF ADLHFGEDTW TDWGPGQDVN SVNVMSAVLD AETPDFVVYL GDVVTANNIA IQNASLFWDK 101: AISPTRDRGI PWATLFGNHD DASFVWPLDW LSSSGIPPLR CPAASDDDGC TFRGTTRVEL IQEEIKSSNA LSYSMISPKE LWPSVSNYVL LVESSDHSKP 201: PVALLYFLDS GGGSYPEVIS NAQVEWFKTK SNTLNPYLRI PELIFWHIPS KAYKKVAPRL WITKPCVGSI NKEKVVAQEA ENGMMRVLEN RSSVKAVFVG 301: HNHGLDWCCP YKDKLWLCFA RHTGYGGYGN WPRGSRILEI SEMPFRIKTW IRMEDGSVHS EVNLTYD |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)