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AT3G09640.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
ASURE: cytosol
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ascorbate peroxidase 2
Curator
Summary (TAIR10)
Encodes a cytosolic ascorbate peroxidase APX2. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms.
Computational
Description (TAIR10)
ascorbate peroxidase 2 (APX2); CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 1 (TAIR:AT1G07890.8); Has 8439 Blast hits to 8256 proteins in 1276 species: Archae - 55; Bacteria - 2395; Metazoa - 20; Fungi - 832; Plants - 3373; Viruses - 0; Other Eukaryotes - 1764 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G09640-MONOMERBioCyc:ARA:GQT-2248-MONOMEREC:1.11.1.11eggNOG:COG0376eggNOG:ENOG410IF5TEMBL:AC016661EMBL:AK176821
EMBL:AK176908EMBL:CP002686EMBL:DQ446651EMBL:X80036EMBL:X98275EnsemblPlants:AT3G09640EnsemblPlants:AT3G09640.1
EnsemblPlants:AT3G09640.2entrez:820121GeneID:820121Genevisible:Q1PER6GO:GO:0005829GO:GO:0006979GO:GO:0016688
GO:GO:0020037GO:GO:0042744GO:GO:0046872GO:GO:0098869Gramene:AT3G09640.1Gramene:AT3G09640.2gramene_pathway:1.11.1.11
gramene_pathway:PWY-2261hmmpanther:PTHR31356hmmpanther:PTHR31356:SF10InParanoid:Q1PER6InterPro:IPR002016InterPro:IPR002207InterPro:IPR010255
InterPro:IPR019793InterPro:IPR019794KEGG:ath:AT3G09640KO:K00434ncoils:CoilOMA:VFKKQMGPaxDb:Q1PER6
PeroxiBase:1888Pfam:PF00141Pfam:Q1PER6Pfscan:PS50873PhylomeDB:Q1PER6PRIDE:Q1PER6PRINTS:PR00458
PRINTS:PR00459PRO:PR:Q1PER6PROSITE:PS00435PROSITE:PS00436PROSITE:PS50873ProteinModelPortal:Q1PER6Proteomes:UP000006548
RefSeq:NP_001030664.1RefSeq:NP_187575.2scanprosite:PS00435scanprosite:PS00436SMR:Q1PER6STRING:3702.AT3G09640.1SUPFAM:SSF48113
TAIR:AT3G09640tair10-symbols:APX1Btair10-symbols:APX2UniGene:At.129UniProt:Q1PER6
Coordinates (TAIR10) chr3:+:2956301..2958163
Molecular Weight (calculated) 28007.60 Da
IEP (calculated) 6.24
GRAVY (calculated) -0.37
Length 251 amino acids
Sequence (TAIR10)
(BLAST)
001: MVKKSYPEVK EEYKKAVQRC KRKLRGLIAE KHCAPIVLRL AWHSAGTFDV KTKTGGPFGT IRHPQELAHD ANNGLDIAVR LLDPIKELFP ILSYADFYQL
101: AGVVAVEITG GPEIPFHPGR LDKVEPPPEG RLPQATKGVD HLRDVFGRMG LNDKDIVALS GGHTLGRCHK ERSGFEGAWT PNPLIFDNSY FKEILSGEKE
201: GLLQLPTDKA LLDDPLFLPF VEKYAADEDA FFEDYTEAHL KLSELGFADK E
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)