AT3G09580.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : FAD/NAD(P)-binding oxidoreductase family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
FAD/NAD(P)-binding oxidoreductase family protein; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family (TAIR:AT5G14220.1); Has 2908 Blast hits to 2906 proteins in 704 species: Archae - 36; Bacteria - 1433; Metazoa - 261; Fungi - 51; Plants - 352; Viruses - 0; Other Eukaryotes - 775 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:2942614..2944047 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 52261.90 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.59 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.01 | ||||||||||||||||||||||||||||||||||||
| Length | 477 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPVAISLPTS STSHFFPRRR GHANHRYQRF SGAQSSTEDP YIRKNQTGVI IIGAGLAGLA AANQLTSKRI PFLLLEASDG VGGRVRTDIV DGFFLDRGFQ 101: IFITAYPEAK KLLDYEALDL QRFYAGAKVF YGGKFHTVAD PLRHFWDSVA SLANPIGSVV DKGLIALTRA RVLIKSDEEI LTAADEVPTI DLLRKIGFSE 201: TILDRFFRPF FGGIFFDRDL ETTSKLFDFV FRCLALGENT LPAMGIGEIS NQLAAKLPAK SVLLNTRVAS IEYPNGSGSD PPSVRLQDGS VMKAELGVII 301: AVEQPEVNKL LDGIRDPVIT KPARSTICLY FTAEPNQIPV QDPVLFLNGS NSGIINNMFF ATNVARTYAP PGKALVSVSL IGLFEDRTDD DLAAEVLREL 401: SGWFGESPVM SWKHLKTYRI QFAQPNQCPP TDLVKSPRVG SGLYLSGDYM TSATFDGALV SGRRAVEVLL RETGLIK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)