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AT3G09530.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : exocyst subunit exo70 family protein H3
Curator
Summary (TAIR10)
A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.
Computational
Description (TAIR10)
exocyst subunit exo70 family protein H3 (EXO70H3); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H4 (TAIR:AT3G09520.1); Has 786 Blast hits to 774 proteins in 86 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi - 29; Plants - 616; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410YIGIeggNOG:KOG2344EMBL:AC016661EMBL:CP002686EMBL:DQ446650EnsemblPlants:AT3G09530EnsemblPlants:AT3G09530.1
entrez:820110GeneID:820110GO:GO:0000145GO:GO:0006887GO:GO:0090406Gramene:AT3G09530.1hmmpanther:PTHR12542
hmmpanther:PTHR12542:SF38HOGENOM:HOG000115135InterPro:IPR004140InterPro:IPR016159KEGG:ath:AT3G09530KO:K07195ncoils:Coil
OMA:EKWNTEYPANTHER:PTHR12542Pfam:PF03081PhylomeDB:Q9SF50Proteomes:UP000006548Reactome:R-ATH-5620916RefSeq:NP_187564.1
STRING:3702.AT3G09530.1SUPFAM:SSF74788TAIR:AT3G09530tair10-symbols:ATEXO70H3tair10-symbols:EXO70H3UniGene:At.53237UniProt:Q9SF50
Coordinates (TAIR10) chr3:+:2926302..2928215
Molecular Weight (calculated) 72118.60 Da
IEP (calculated) 8.55
GRAVY (calculated) -0.35
Length 637 amino acids
Sequence (TAIR10)
(BLAST)
001: MRSKSGFSFF SKMTSSRKRP SLSLPSKSHE STDVNKTIDN AAEIIEKWNT EYVSDKKFYS LFCESKRDAK KFVKRVKELQ NAMDLLIRED PNSEKLLRAQ
101: NLMQIAMKRL QKEFLQILSM NRAHLDPESI SSRSPTSVVS NDDDVWHESR SAGDSIIEVE EVSKNSRTEL KSIADCMIAA GCAKECATTY KSIRKSIVDE
201: SIYRLGVENI SSSKAKKMPC EVVELKMNRW IEAVKVSMKT LFNGEKTLCD EIFESSVSLR EFCFRDISKE GALLLFGFPE TITLRDKKNP HPEKIFPLLD
301: MYCTITDNLL AIEAIFSFPS ISNVRTQAHS SLSRLSESIL AHLMDFESQI RKDSSKTVVR GGGVHPMTIS AMNHISRLAE YSNALINILK GSSSSSSAKA
401: LLPKSYFNVS ESEESPVSEL KARFAWMILV LLCKIDGKAE MYKDFSMQYL FLANNLQHVV SRARSTNVKH VLGNDWIAKN SEKVRQFARS YERLAWGPLA
501: SMCPAISTSE AVEMSPEEAM MQFKKFNETF ESTCEAQSEC IVLDPKLLDE MRISIGRKLL PVYRDFYNAH RNAVMLAGTE GQWNVRYNPE DIGNHLSELF
601: SGKGISEKGY VCTPDFCVTT PTPTPVRKTR SLSCRRF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)