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AT3G09440.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31932409 (2020): plastid
  • PMID:31871212 (2020): mitochondrion
  • PMID:31818904 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31541795 (2020): plasma membrane
  • PMID:31520498 (2020): mitochondrion
  • PMID:31186290 (2019): cytosol None
  • PMID:31023727 (2019): mitochondrion
  • PMID:30962257 (2019): plastid
  • PMID:30961429 (2019): nucleus
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30447334 (2019): plasma membrane
  • PMID:30135097 (2018): plastid
  • PMID:29104584 (2017): nucleus nuclear matrix nucleolus
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
  • PMID:27137770 (2016): plastid plastid stroma
  • PMID:26781341 (2016): plasma membrane
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25641898 (2015): plasma membrane
  • PMID:24727099 (2014): mitochondrion
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:24134884 (2013): cytoskeleton microtubules
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22574745 (2012): mitochondrion
  • PMID:22550958 (2012): plastid
  • PMID:22522809 (2012): cytosol cytosolic ribosomes
  • PMID:22430844 (2012): Golgi
  • PMID:22318864 (2012): plasma membrane
  • PMID:22215637 (2012): plasma membrane
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:21531424 (2011): plastid
  • PMID:21433285 (2011): plasma membrane
  • PMID:21166475 (2011): cytosol
  • PMID:20843791 (2010): plasma membrane
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:20061580 (2010): plastid plastid envelope
  • PMID:19334764 (2009): plasma membrane
  • PMID:17644812 (2007): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:17151019 (2007): plant-type vacuole
  • PMID:14760709 (2004): plant-type vacuole
  • PMID:14505352 (2003): nucleus
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Heat shock protein 70 (Hsp 70) family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cadmium ion, response to karrikin, response to heat; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34172 Blast hits to 33801 proteins in 4833 species: Archae - 161; Bacteria - 16465; Metazoa - 3857; Fungi - 1750; Plants - 1254; Viruses - 309; Other Eukaryotes - 10376 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-199-MONOMERBioCyc:ARA:GQT-37-MONOMERBioGrid:5436eggNOG:COG0443
eggNOG:KOG0101EMBL:AC011436EMBL:AC016661EMBL:AK222065
EMBL:AY050896EMBL:AY096676EMBL:AY102116EMBL:BT001066
EMBL:CP002686EMBL:F20026EMBL:Y08903EMBL:Y17053
EnsemblPlants:AT3G09440EnsemblPlants:AT3G09440.1EnsemblPlants:AT3G09440.2entrez:820102
Gene3D:1.20.1270.10Gene3D:2.60.34.10GeneID:820102Genevisible:O65719
GO:GO:0002020GO:GO:0005524GO:GO:0005618GO:GO:0005773
GO:GO:0005774GO:GO:0005794GO:GO:0005829GO:GO:0005886
GO:GO:0009408GO:GO:0009506GO:GO:0009507GO:GO:0009615
GO:GO:0016363GO:GO:0022626GO:GO:0046686GO:GO:0048046
GO:GO:0080167Gramene:AT3G09440.1Gramene:AT3G09440.2hmmpanther:PTHR19375
hmmpanther:PTHR19375:SF232HOGENOM:HOG000228135InParanoid:O65719IntAct:O65719
InterPro:IPR013126InterPro:IPR018181InterPro:IPR029047InterPro:IPR029048
iPTMnet:O65719KEGG:ath:AT3G09440KO:K03283ncoils:Coil
OMA:DFYAPITPaxDb:O65719Pfam:O65719Pfam:PF00012
PhylomeDB:O65719PRIDE:O65719PRINTS:PR00301PRO:PR:O65719
PROSITE:PS00297PROSITE:PS00329PROSITE:PS01036ProteinModelPortal:O65719
Proteomes:UP000006548Reactome:R-ATH-3371453Reactome:R-ATH-3371568Reactome:R-ATH-3371571
Reactome:R-ATH-72163RefSeq:NP_001189847.1RefSeq:NP_187555.1scanprosite:PS00297
scanprosite:PS00329scanprosite:PS01036SMR:O65719STRING:3702.AT3G09440.1
SUPFAM:SSF100920SUPFAM:SSF100934SUPFAM:SSF53067SWISS-2DPAGE:O65719
SwissPalm:O65719TAIR:AT3G09440UniGene:At.22293UniProt:O65719
World-2DPAGE:0003:O65719
Coordinates (TAIR10) chr3:-:2903434..2905632
Molecular Weight (calculated) 71151.60 Da
IEP (calculated) 4.69
GRAVY (calculated) -0.39
Length 649 amino acids
Sequence (TAIR10)
(BLAST)
001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPINTV FDAKRLIGRR FTDSSVQSDI KLWPFTLKSG
101: PAEKPMIVVN YKGEDKEFSA EEISSMILIK MREIAEAYLG TTIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVMRIINEP TAAAIAYGLD KKATSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIS GNPRALRRLR TACERAKRTL SSTAQTTIEI DSLFDGIDFY
301: APITRARFEE LNIDLFRKCM EPVEKCLRDA KMDKNSIDDV VLVGGSTRIP KVQQLLVDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTVLI QRNTTIPTKK EQVFSTYSDN QPGVLIQVYE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKDE IEKMVQEAEK YKSEDEEHKK KVDAKNALEN YAYNMRNTIR DEKIGEKLAG DDKKKIEDSI EAAIEWLEAN QLAECDEFED
601: KMKELESICN PIIAKMYQGG EAGGPAAGGM DEDVPPSAGG AGPKIEEVD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)