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AT3G09410.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31673584 (2019): extracellular region plant-type cell wall
  • PMID:26572690 (2016): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Pectinacetylesterase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT3G09405.1); Has 557 Blast hits to 548 proteins in 93 species: Archae - 0; Bacteria - 46; Metazoa - 119; Fungi - 0; Plants - 303; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink).
Protein Annotations
EC:3.1.1.-eggNOG:ENOG410XQKDeggNOG:KOG4287EMBL:AC011436
EMBL:AK227569EMBL:BT029739EMBL:CP002686EnsemblPlants:AT3G09410
EnsemblPlants:AT3G09410.1EnsemblPlants:AT3G09410.3entrez:820100ESTHER:arath-q9sr22
ExpressionAtlas:Q9SR22GeneID:820100Genevisible:Q9SR22GO:GO:0005576
GO:GO:0005618GO:GO:0016787GO:GO:0071555hmmpanther:PTHR21562
hmmpanther:PTHR21562:SF6HOGENOM:HOG000238558InterPro:IPR004963InterPro:IPR029058
KEGG:ath:AT3G09410OMA:FFNWNKVPANTHER:PTHR21562PaxDb:Q9SR22
Pfam:PF03283Pfam:Q9SR22PhylomeDB:Q9SR22PRIDE:Q9SR22
PRO:PR:Q9SR22ProteinModelPortal:Q9SR22Proteomes:UP000006548RefSeq:NP_187552.3
RefSeq:NP_974267.2SMR:Q9SR22STRING:3702.AT3G09410.1SUPFAM:SSF53474
SwissPalm:Q9SR22TAIR:AT3G09410TMHMM:TMhelixUniGene:At.40110
UniGene:At.74994UniProt:Q9SR22
Coordinates (TAIR10) chr3:-:2898243..2900984
Molecular Weight (calculated) 47639.80 Da
IEP (calculated) 7.19
GRAVY (calculated) -0.14
Length 427 amino acids
Sequence (TAIR10)
(BLAST)
001: MAIPRFSSLL RCRKWAKSDW LVASIGCVLI VFFLSFFFDP TSDSVPSVDR SRPIISPSDL VKLKLSSVAK ERGAFCLDGS LPGYHFHEGS GSGSQSWLVH
101: LEGGGWCNTV ASCSARALTK LGSSNYFEQE VAFQGVLSSD PSQNPEFFNW NKVAIRYCDG ASFSGRPEAE FKNGTRLFFR GQLIWEAIID ELLSMGMSDA
201: KQAILTGCSA GGLASLIHCD YFRDHLPKDA AVKCVSDGGY FLNVPDVLGN PTMRSFYHDV VNLQGVEKSL DQKCVAKTEP SKCMFPQEFL KNIRTPVFLV
301: NPAYDFWQIQ HVLVPTSADP DKSWAKCRLN IKECDAEQIK VLHGFRSSMM TAIGEFHQNK DGGMFIDSCY AHCQTVMSVT WHSLTSPRIE NKTIAESVGD
401: WYFNRKPVKL IDCPYPCNPS CYNMNFT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)