AT3G09405.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.648 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Pectinacetylesterase family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Pectinacetylesterase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT3G09410.1); Has 559 Blast hits to 551 proteins in 94 species: Archae - 2; Bacteria - 43; Metazoa - 119; Fungi - 0; Plants - 302; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:2895009..2897366 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 45751.50 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.76 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.17 | ||||||||||||||||||||||||||||||||||||||||
| Length | 409 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVIRSLLQCR TWSKSDWLLA SIGIVLIVYS FSLSFNSTSD SIPSVDRSDL VKLKLSSKAK ERGAFCLDGS LPGYHFHKGS GSGSNSWLLY LEGGGGCRTI 101: ESCSARAMTR LGSSNFFEHE VPFFGVLSSD PSQNPDFFNW NRVMIRYCDG ACFSGHPEAE FKNETRLFFR GQLIWEAIMD ELLSMGMSHA KRAMLTGCSA 201: GGLSTLIHCD YFRDHLPKDA TVKCVSDGGY ILNVLDVLGN PTMGSFFHDV VTLQSVDKSL DQNCVAKMEP SKCMFPQESL KNIRTPVFLV NTAYDYWQIQ 301: NGLVPDSPDL DERWKICRLN IQECDAAQMK VLHGFRSSLI DAIGEFHVNK EGGMFINSCN SHCQIRESWH SATSTRIENK TIAESVGDWY FNRKPVKLID 401: CPYPCNASC |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)