suba logo
AT3G09390.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
plasma membrane 0.811
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : metallothionein 2A
Curator
Summary (TAIR10)
metallothionein, binds to and detoxifies excess copper and other metals, limiting oxidative damage
Computational
Description (TAIR10)
metallothionein 2A (MT2A); CONTAINS InterPro DOMAIN/s: Plant metallothionein, family 15 (InterPro:IPR000347); BEST Arabidopsis thaliana protein match is: metallothionein 2B (TAIR:AT5G02380.1); Has 597 Blast hits to 588 proteins in 128 species: Archae - 0; Bacteria - 0; Metazoa - 53; Fungi - 2; Plants - 530; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Protein Annotations
BioGrid:5432eggNOG:ENOG410J5R6eggNOG:ENOG410Z616EMBL:AC011436EMBL:AY037263EMBL:AY077669EMBL:CP002686
EMBL:D11394EMBL:U15108EMBL:X62818EMBL:Z26416EnsemblPlants:AT3G09390EnsemblPlants:AT3G09390.1entrez:820098
GeneID:820098Genevisible:P25860GO:GO:0005507GO:GO:0005623GO:GO:0006878Gramene:AT3G09390.1hmmpanther:PTHR33543
HOGENOM:HOG000220916InParanoid:P25860InterPro:IPR000347KEGG:ath:AT3G09390OMA:YPEMDEGPaxDb:P25860Pfam:P25860
Pfam:PF01439PhylomeDB:P25860PIR:S18069PIR:S57861PRIDE:P25860PRO:PR:P25860ProteinModelPortal:P25860
Proteomes:UP000006548RefSeq:NP_187550.1STRING:3702.AT3G09390.1TAIR:AT3G09390tair10-symbols:ATMT-1tair10-symbols:ATMT-Ktair10-symbols:MT2A
UniGene:At.24444UniGene:At.42166UniGene:At.67557UniProt:P25860
Coordinates (TAIR10) chr3:-:2889737..2890188
Molecular Weight (calculated) 8163.52 Da
IEP (calculated) 4.35
GRAVY (calculated) -0.37
Length 81 amino acids
Sequence (TAIR10)
(BLAST)
1: MSCCGGNCGC GSGCKCGNGC GGCKMYPDLG FSGETTTTET FVLGVAPAMK NQYEASGESN NAENDACKCG SDCKCDPCTC K
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)