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AT3G09300.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.998
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : OSBP(oxysterol binding protein)-related protein 3B
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
OSBP(oxysterol binding protein)-related protein 3B (ORP3B); FUNCTIONS IN: oxysterol binding; INVOLVED IN: steroid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Oxysterol-binding protein, conserved site (InterPro:IPR018494), Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: Oxysterol-binding family protein (TAIR:AT5G02100.1); Has 2352 Blast hits to 2318 proteins in 216 species: Archae - 0; Bacteria - 0; Metazoa - 1124; Fungi - 669; Plants - 282; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XP9EeggNOG:KOG1737EMBL:AC011436EMBL:AY062703EMBL:AY093373EMBL:CP002686EnsemblPlants:AT3G09300
EnsemblPlants:AT3G09300.1entrez:820086GeneID:820086Genevisible:Q9SR33GO:GO:0005829GO:GO:0006869GO:GO:0008289
Gramene:AT3G09300.1hmmpanther:PTHR10972HOGENOM:HOG000239955InParanoid:Q9SR33InterPro:IPR000648InterPro:IPR018494iPTMnet:Q9SR33
KEGG:ath:AT3G09300OMA:PKSIQFNPANTHER:PTHR10972PaxDb:Q9SR33Pfam:PF01237Pfam:Q9SR33PhylomeDB:Q9SR33
PRIDE:Q9SR33PRO:PR:Q9SR33PROSITE:PS01013ProteinModelPortal:Q9SR33Proteomes:UP000006548RefSeq:NP_187541.1scanprosite:PS01013
SMR:Q9SR33STRING:3702.AT3G09300.1SUPFAM:0051579TAIR:AT3G09300tair10-symbols:ORP3BUniGene:At.48636UniGene:At.70394
UniProt:Q9SR33
Coordinates (TAIR10) chr3:+:2858068..2860462
Molecular Weight (calculated) 51959.00 Da
IEP (calculated) 4.82
GRAVY (calculated) -0.65
Length 458 amino acids
Sequence (TAIR10)
(BLAST)
001: MAPNDPKKAV GGGGSGFFAS LASSISNLGS AMTKSVNGLV PYEGLEVINP EGSTDDAEEE ASRGRWKQED RDGYWKMMQK YIGSDVTSMV TLPVIIFEPM
101: TMLQKMAELM EYSHLLDMAD KTEDPYLRMV YASSWAISVY YAFQRTWKPF NPILGETYEM ANYNGVNFIS EQVSHHPPMS AGHAENEHFT YDCTSKLKTK
201: FLGNSIDVYP VGRTRVTLKR DGVVLDLVPP LTKVHNLIFG RTWVDSPGEM IMTNQTTGDK VVLYFQPCGW FGSGRYEVDG YVYNASEEPK ILMTGKWNES
301: MSYQPCDGEG EPLPGTELKE VWKLADVPKD DKYQYTHFAH KINSFDTAPK KLLPSDSRLR PDRYALEMGD MSKSGYEKSS MEERQRAEKR TREEKGQAFT
401: PKWFDVTEEV TATPWGDLEV YQFNGKYSEH RAAADNSEDN TDPKSIQFNP WQFQDLST
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)