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AT3G09280.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 0.995
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; Has 31 Blast hits to 31 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J85FeggNOG:ENOG410ZAIAEMBL:AC011436EMBL:AY924766EMBL:CP002686EnsemblPlants:AT3G09280EnsemblPlants:AT3G09280.1
entrez:820084GeneID:820084GO:GO:0016021Gramene:AT3G09280.1hmmpanther:PTHR34558hmmpanther:PTHR34558:SF1HOGENOM:HOG000153524
KEGG:ath:AT3G09280OMA:HEWPGEEPhylomeDB:Q9SR35Proteomes:UP000006548RefSeq:NP_187539.1STRING:3702.AT3G09280.1TAIR:AT3G09280
TMHMM:TMhelixUniGene:At.65073UniProt:Q9SR35
Coordinates (TAIR10) chr3:-:2850920..2851258
Molecular Weight (calculated) 12397.80 Da
IEP (calculated) 6.88
GRAVY (calculated) -0.22
Length 112 amino acids
Sequence (TAIR10)
(BLAST)
001: MDAKHIVLCF LLTYVFSMAA ASSEAEPPAT RKLGRHEWPG EEAEAPEVSH LEETVRRGHH HSTVERSVAG GGVILGGLAT TFLVVVFCYI RATRKHKPNY
101: DEKETETPKV LV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)