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AT3G09020.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
golgi 0.567
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha 1,4-glycosyltransferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha 1,4-glycosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi stack; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Alpha 1,4-glycosyltransferase conserved region (InterPro:IPR007652), Glycosyltransferase, DXD sugar-binding region (InterPro:IPR007577); BEST Arabidopsis thaliana protein match is: alpha 1,4-glycosyltransferase family protein (TAIR:AT5G01250.1); Has 364 Blast hits to 360 proteins in 67 species: Archae - 2; Bacteria - 16; Metazoa - 234; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Protein Annotations
CAZy:GT32eggNOG:ENOG4111PD8eggNOG:KOG1928EMBL:AC009326EMBL:AC010871EMBL:CP002686EMBL:KJ138833
EnsemblPlants:AT3G09020EnsemblPlants:AT3G09020.1entrez:820054GeneID:820054GO:GO:0016021GO:GO:0016740Gramene:AT3G09020.1
hmmpanther:PTHR12042hmmpanther:PTHR12042:SF18HOGENOM:HOG000030686InterPro:IPR007577InterPro:IPR007652InterPro:IPR029044KEGG:ath:AT3G09020
KO:K01988OMA:LRDDCEVPfam:PF04488Pfam:PF04572PhylomeDB:Q9S790Proteomes:UP000006548RefSeq:NP_187514.1
SMR:Q9S790STRING:3702.AT3G09020.1SUPFAM:SSF53448TAIR:AT3G09020TMHMM:TMhelixUniGene:At.40184UniGene:At.74993
UniProt:Q9S790
Coordinates (TAIR10) chr3:+:2753307..2754542
Molecular Weight (calculated) 46854.90 Da
IEP (calculated) 9.39
GRAVY (calculated) -0.09
Length 411 amino acids
Sequence (TAIR10)
(BLAST)
001: MDHDITTKVR AMFDHRRLNR SGSSLFTAFA STVIALVVFT IVLVSNLSVR EDFSAKVVTI EIKTIVPYLP LSSEKEVSDQ VNNNYSIKQQ ITVKEEINKL
101: QVLEVFGGKD VSEKFQQRAT EFLRDDCEVK FMMTWISPAE LFGKREILSV ESVFKSHARG CLMILSSTMD SLQGFRILKP FLDRGYRVMA VTPDLPFLLK
201: DTAGESWLEE IQTGKRDPGK ISLAQNLSNL MRLAYLFKFG GVYLDTDMIV LKSFKTLRNV IGAQTLEPVS RNWTRLNNAV LIFDKNHPFL LKSIEEFALT
301: FNGNVWGHNG PYLVSRVARA VEGTDGYNFT ILTPPAFYPV NWVEIEKLFK VPRTEKDSKR VQVKVLEMQK RSYGLHLWNK FSRKFEIEQG SAMDKLVSNQ
401: CIICDSVVSV S
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)