AT3G08870.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Concanavalin A-like lectin protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: lectin receptor kinase a4.1 (TAIR:AT5G01550.1); Has 126249 Blast hits to 124574 proteins in 5056 species: Archae - 117; Bacteria - 14623; Metazoa - 46287; Fungi - 11015; Plants - 35222; Viruses - 451; Other Eukaryotes - 18534 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:2700500..2702581 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 77604.50 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.95 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.22 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 693 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGIARSINSF MFFFFLMILS NASKSSVLAE ATTAKFTFIG FKENQTDIQT EGASTIQHDN DLLRLTNRKQ NVTGTAFYRK PIRLRELTNS SDIKVCSFST 101: SFVFVILPSS PGNGGFGFTF TLSPTPNRPG AESAQYLGLL NRTNNGNPSN HVFAVEFDTV QGFKDGADRR GNHIGLNFNN LSSNVQEPLI YYDTEDRKED 201: FQLESGEPIR VLIDYDGSSE TLNVTIYPTR LEFKPKKPLI SRRVSELSEI VKDEMYVGFT AATGKDQSSA HYVMGWSFSS CGENPMADWL EISRLPPPPR 301: LSNKKGYNSQ VIVLIVALSI VTLVLLVLLF IFVMYKRRIQ EEDTLEDWEI DYPHRFRYRD LYLATKKFKE SEIIGTGGFG IVYRGNLSSS GPIAVKKITS 401: NSLQGVREFM AEIESLGRLG HKNLVNLQGW CKHKNELLLI YDYIPNGSLD SLLYQTPRRN GIVLPWDVRF EIIKGIASGL LYLHEEWEQI VVHRDVKPSN 501: VLIDEDMNAK LGDFGLARLY ERGTLTQTTK IVGTLGYMAP ELTRNGKGST ASDVFAFGVL LLEIVCGNKP TNAENFFLAD WVMEFHTNGG ILCVVDQNLG 601: SSFNGREAKL ALVVGLLCCH QKPKFRPSMR MVLRYLNGEE NVPQIDENWG FSDSSRDDHK SNVVGYVSSD RASSSNTFSS FSNVSSSSIV SGR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)