AT3G08650.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.996 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ZIP metal ion transporter family | ||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
ZIP metal ion transporter family; FUNCTIONS IN: metal ion transmembrane transporter activity; INVOLVED IN: transmembrane transport, metal ion transport; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: ZIP metal ion transporter family (TAIR:AT3G20870.1); Has 4142 Blast hits to 3425 proteins in 1059 species: Archae - 130; Bacteria - 2604; Metazoa - 766; Fungi - 8; Plants - 161; Viruses - 0; Other Eukaryotes - 473 (source: NCBI BLink). | ||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:2624694..2626879 | ||||||||
| Molecular Weight (calculated) | 61927.40 Da | ||||||||
| IEP (calculated) | 7.55 | ||||||||
| GRAVY (calculated) | 0.72 | ||||||||
| Length | 595 amino acids | ||||||||
| Sequence (TAIR10) (BLAST) |
001: MMHSSCKGLV LLLFLFVVVF IGNTDANAQW EVSHKVRASP HENMGRNVID GSGVEKTLHD IGMGEKRGTH NKVSVSTVAL FTLAMAAATG LGAVPFFFVE 101: LDPQWAGICN GMAAGVMLAA SFDLVKEGQE HGSGNWVVTG ILAGALFIWL CKQILEQYGE VSMLDIKGAD ATKVVLVIGI MTLHSFGEGS GVGVSFAGSK 201: GFSQGLLVTL AIAVHNIPEG LAVSMVLASR GVSPQNAMLW SIITSLPQPL VAVPAFLCAD AFSKFLPFCT GFAAGCMIWM VIAEVLPDAF KEASPSQVAS 301: AATISVASME ALSTLFESFT HDYNSEDASG FFVSLLFGLG PLLGGVFLVA SAVTFRLQHA LLMGVASGIA FVLGLWRPLQ LLLSAKMGLI PLVSLLAIGA 401: GLSHFTSSTI LNVTGRKKSR AGSLINPVTN FPTSVITLQS LLACGAVGFH ALAEGLALGV AAPNAYGLGR HMVLPVSLHG LPRGTAVASC VFGATDSWHA 501: ALAAAALIGF VGPISAIGSI LAGIDYSGLD HVMVVACGGL LPSFWQVIKR AVRLERRKGS VGMVLGLACA VVCLTFTRLV CLHTPYCNSA PEAVR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)