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AT3G08610.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 40 Blast hits to 40 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G08610-MONOMERBioCyc:MetaCyc:AT3G08610-MONOMEReggNOG:ENOG410J2T7eggNOG:ENOG410Z9T9EMBL:AC012562EMBL:AK220620EMBL:AK227324
EMBL:AY088759EMBL:BT006372EMBL:CP002686EnsemblPlants:AT3G08610EnsemblPlants:AT3G08610.1entrez:820008GeneID:820008
Genevisible:Q9C9Z5GO:GO:0005739GO:GO:0005747GO:GO:0016021GO:GO:0055114Gramene:AT3G08610.1hmmpanther:PTHR17098
hmmpanther:PTHR17098:SF2HOGENOM:HOG000241498InParanoid:Q9C9Z5IntAct:Q9C9Z5InterPro:IPR017384KEGG:ath:AT3G08610KO:K03945
OMA:HKAAHGRPANTHER:PTHR17098PaxDb:Q9C9Z5Pfam:PF15879Pfam:Q9C9Z5PhylomeDB:Q9C9Z5PRIDE:Q9C9Z5
PRO:PR:Q9C9Z5Proteomes:UP000006548RefSeq:NP_566330.1STRING:3702.AT3G08610.1TAIR:AT3G08610TCDB:3.D.1.6.3TMHMM:TMhelix
UniGene:At.17613UniProt:Q9C9Z5
Coordinates (TAIR10) chr3:-:2616435..2616768
Molecular Weight (calculated) 7338.04 Da
IEP (calculated) 8.50
GRAVY (calculated) -0.19
Length 65 amino acids
Sequence (TAIR10)
(BLAST)
1: MSLVWLEAML PLGIIGGMLC IMGNSQYYIH KAYHGRPKHI GHDEWDVAME RRDKKVVEKA AAPSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)