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AT3G08510.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26781341 (2016): plasma membrane
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25641898 (2015): plasma membrane
  • PMID:23990937 (2013): plasma membrane
  • PMID:22923678 (2012): plasma membrane
  • PMID:22318864 (2012): plasma membrane
  • PMID:22215637 (2012): plasma membrane
  • PMID:21433285 (2011): plasma membrane
  • PMID:20843791 (2010): plasma membrane
  • PMID:20374526 (2010): plasma membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:18686298 (2008): plant-type vacuole plant-type vacuole membrane
  • PMID:17644812 (2007): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:16635983 (2006): plasma membrane
  • PMID:15574830 (2004): plasma membrane
  • PMID:15308754 (2004): plasma membrane
  • PMID:14506206 (2003): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : phospholipase C 2
Curator
Summary (TAIR10)
Phosphoinositide-specific phospholipase C (PI-PLC), catalyzes hydrolysis of phosphatidylinositol 4,5-bisphosphate into inositol 1,4,5-trisphosphate and diacylglycerol.
Computational
Description (TAIR10)
phospholipase C 2 (PLC2); FUNCTIONS IN: phospholipase C activity; INVOLVED IN: signal transduction, intracellular signaling pathway, lipid metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphoinositol-specific, EF-hand-like (InterPro:IPR015359), Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase C, phosphoinositol-specific (InterPro:IPR001192), C2 calcium-dependent membrane targeting (InterPro:IPR000008), Phospholipase C, phosphatidylinositol-specific, Y domain (InterPro:IPR001711); BEST Arabidopsis thaliana protein match is: Phosphoinositide-specific phospholipase C family protein (TAIR:AT3G55940.1); Has 2471 Blast hits to 1979 proteins in 261 species: Archae - 0; Bacteria - 0; Metazoa - 1631; Fungi - 374; Plants - 251; Viruses - 0; Other Eukaryotes - 215 (source: NCBI BLink).
Protein Annotations
EC:3.1.4.11eggNOG:ENOG410XPSWeggNOG:KOG0169EMBL:AK318857EnsemblPlants:AT3G08510EnsemblPlants:AT3G08510.1EnsemblPlants:AT3G08510.2
entrez:819999ExpressionAtlas:C0Z2P3Gene3D:1.10.238.10Gene3D:2.60.40.150Gene3D:3.20.20.190GeneID:819999GO:GO:0004435
GO:GO:0004871GO:GO:0005622GO:GO:0016042GO:GO:0035556Gramene:AT3G08510.1Gramene:AT3G08510.2hmmpanther:PTHR10336
hmmpanther:PTHR10336:SF92InterPro:IPR000008InterPro:IPR000909InterPro:IPR001192InterPro:IPR001711InterPro:IPR011992InterPro:IPR015359
InterPro:IPR017946iPTMnet:C0Z2P3KEGG:00562+3.1.4.11KEGG:04070+3.1.4.11KEGG:ath:AT3G08510KO:K05857ncoils:Coil
OMA:HIRITNLPANTHER:PTHR10336PaxDb:C0Z2P3Pfam:PF00168Pfam:PF00387Pfam:PF00388Pfam:PF09279
Pfam:Q39033Pfscan:PS50004Pfscan:PS50007Pfscan:PS50008PhylomeDB:C0Z2P3PRIDE:C0Z2P3PRINTS:PR00390
PROSITE:PS50004PROSITE:PS50007PROSITE:PS50008ProteinModelPortal:C0Z2P3RefSeq:NP_001030660.1RefSeq:NP_187464.1SMART:SM00148
SMART:SM00149SMART:SM00239SMR:C0Z2P3STRING:3702.AT3G08510.1SUPFAM:SSF47473SUPFAM:SSF49562SUPFAM:SSF51695
TAIR:AT3G08510tair10-symbols:ATPLC2tair10-symbols:PLC2UniGene:At.20554UniProt:C0Z2P3UniProt:Q39033
Coordinates (TAIR10) chr3:-:2582626..2585556
Molecular Weight (calculated) 66125.80 Da
IEP (calculated) 6.52
GRAVY (calculated) -0.47
Length 581 amino acids
Sequence (TAIR10)
(BLAST)
001: MSKQTYKVCF CFRRRFRYTA SEAPREIKTI FEKYSENGVM TVDHLHRFLI DVQKQDKATR EDAQSIINSA SSLLHRNGLH LDAFFKYLFG DNNPPLALHK
101: VHHDMDAPIS HYFIFTGHNS YLTGNQLSSD CSEVPIIDAL KKGVRVIELD IWPNSNKDDI DVLHGMTLTT PVGLIKCLKA IRAHAFDVSD YPVVVTLEDH
201: LTPDLQSKVA EMVTEIFGEI LFTPPVGESL KEFPSPNSLK RRIIISTKPP KEYKEGKDVE VVQKGKDLGD EEVWGREVPS FIQRNKSEAK DDLDGNDDDD
301: DDDDEDKSKI NAPPQYKHLI AIHAGKPKGG ITECLKVDPD KVRRLSLSEE QLEKAAEKYA KQIVRFTQHN LLRIYPKGTR VTSSNYNPLV GWSHGAQMVA
401: FNMQGYGRSL WLMQGMFRAN GGCGYIKKPD LLLKSGSDSD IFDPKATLPV KTTLRVTVYM GEGWYFDFRH THFDQYSPPD FYTRVGIAGV PGDTVMKKTK
501: TLEDNWIPAW DEVFEFPLTV PELALLRLEV HEYDMSEKDD FGGQTCLPVW ELSEGIRAFP LHSRKGEKYK SVKLLVKVEF V
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)