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AT3G07760.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.980
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Sterile alpha motif (SAM) domain-containing protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Sterile alpha motif (SAM) domain-containing protein; CONTAINS InterPro DOMAIN/s: Sterile alpha motif (InterPro:IPR001660), Sterile alpha motif homology (InterPro:IPR010993), Sterile alpha motif, type 2 (InterPro:IPR011510); Has 60 Blast hits to 60 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 6; Plants - 44; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Protein Annotations
DNASU:819967eggNOG:ENOG410IX34eggNOG:ENOG410YHYQEMBL:AF428412EMBL:AY054591EMBL:AY064693EMBL:AY088501
EMBL:CP002686EnsemblPlants:AT3G07760EnsemblPlants:AT3G07760.1EnsemblPlants:AT3G07760.2entrez:819967Gene3D:1.10.150.50GeneID:819967
Gramene:AT3G07760.1Gramene:AT3G07760.2hmmpanther:PTHR24176InterPro:IPR001660InterPro:IPR013761KEGG:ath:AT3G07760OMA:GGYRQIF
Pfam:PF07647Pfscan:PS50105PROSITE:PS50105Proteomes:UP000006548RefSeq:NP_566319.1RefSeq:NP_850538.1SMR:Q93VV3
SUPFAM:SSF47769TAIR:AT3G07760UniGene:At.18346UniProt:Q93VV3
Coordinates (TAIR10) chr3:+:2476723..2477947
Molecular Weight (calculated) 14820.00 Da
IEP (calculated) 9.73
GRAVY (calculated) -0.37
Length 125 amino acids
Sequence (TAIR10)
(BLAST)
001: MTREHPPEPL DFFIWTVEDV GSWLEEINLG GYRQIFKENG VNGEYLESMS VFTTEQILHF IRRHHMKWGD FITLCKELRR IKVACLKGEQ RVRRPWWAPS
101: CLSVVFVKAA KRNRQSRVVS LKLES
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)