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AT3G07670.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:24872594 (2014): plastid
  • PMID:23549413 (2013): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Rubisco methyltransferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Rubisco methyltransferase family protein; FUNCTIONS IN: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rubisco methyltransferase (InterPro:IPR011192), SET domain (InterPro:IPR001214), Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT5G14260.2); Has 1290 Blast hits to 1288 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 264; Fungi - 357; Plants - 465; Viruses - 0; Other Eukaryotes - 204 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-1361-MONOMEReggNOG:ENOG410Y7DReggNOG:KOG1337EMBL:AC009176EMBL:AC013483EMBL:AY045925EMBL:AY079335
EMBL:CP002686EnsemblPlants:AT3G07670EnsemblPlants:AT3G07670.1entrez:819958Gene3D:3.90.1420.10GeneID:819958GO:GO:0009507
GO:GO:0030785Gramene:AT3G07670.1hmmpanther:PTHR13271hmmpanther:PTHR13271:SF44IntAct:Q9S7D2InterPro:IPR001214InterPro:IPR011192
InterPro:IPR015353KEGG:ath:AT3G07670OMA:SSRWSNYPfam:PF00856Pfam:PF09273Pfscan:PS50280PhylomeDB:Q9S7D2
PIRSF:PIRSF009328PROSITE:PS50280Proteomes:UP000006548RefSeq:NP_187424.1SMART:SM00317SMR:Q9S7D2STRING:3702.AT3G07670.1
SUPFAM:0040997SUPFAM:SSF81822SUPFAM:SSF82199TAIR:AT3G07670UniGene:At.10573UniProt:Q9S7D2
Coordinates (TAIR10) chr3:+:2451651..2454617
Molecular Weight (calculated) 57617.00 Da
IEP (calculated) 8.17
GRAVY (calculated) -0.38
Length 504 amino acids
Sequence (TAIR10)
(BLAST)
001: MAKACLLQST LLPAYSPLHK LRNQNITLSF SPLPLSRCRP GIHCSVSAGE TTIQSMEEAP KISWGCEIDS LENATSLQNW LSDSGLPPQK MAIDRVDIGE
101: RGLVASQNLR KGEKLLFVPP SLVISADSEW TNAEAGEVMK RYDVPDWPLL ATYLISEASL QKSSRWFNYI SALPRQPYSL LYWTRTELDM YLEASQIRER
201: AIERITNVVG TYEDLRSRIF SKHPQLFPKE VFNDETFKWS FGILFSRLVR LPSMDGRFAL VPWADMLNHN CEVETFLDYD KSSKGVVFTT DRPYQPGEQV
301: FISYGNKSNG ELLLSYGFVP REGTNPSDSV ELALSLRKND KCYEEKLDAL KKHGLSTPQC FPVRITGWPM ELMAYAYLVV SPPDMRNNFE EMAKAASNKT
401: STKNDLKYPE IEEDALQFIL DSCETSISKY SRFLKESGSM DLDITSPKQL NRKAFLKQLA VDLSTSERRI LYRAQYILRR RLRDIRSGEL KALRLFSGLR
501: NFFK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)