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AT3G07310.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Protein of unknown function (DUF760)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF760); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF760 (InterPro:IPR008479); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF760) (TAIR:AT5G48590.1); Has 147 Blast hits to 143 proteins in 27 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IFM1eggNOG:ENOG410YC8BEMBL:AC009853EMBL:AC012395EMBL:AY042881EMBL:AY087626EMBL:AY128715
EMBL:CP002686EnsemblPlants:AT3G07310EnsemblPlants:AT3G07310.1entrez:819919GeneID:819919Gramene:AT3G07310.1hmmpanther:PTHR31808
hmmpanther:PTHR31808:SF2HOGENOM:HOG000240370IntAct:Q9S7A6InterPro:IPR008479KEGG:ath:AT3G07310OMA:YFLKSVTPfam:PF05542
PhylomeDB:Q9S7A6Proteomes:UP000006548RefSeq:NP_566302.1STRING:3702.AT3G07310.1TAIR:AT3G07310UniGene:At.21337UniProt:Q9S7A6
Coordinates (TAIR10) chr3:-:2328057..2329677
Molecular Weight (calculated) 41370.40 Da
IEP (calculated) 8.30
GRAVY (calculated) -0.32
Length 368 amino acids
Sequence (TAIR10)
(BLAST)
001: MDSCLSNQTA LQFLPSRSRR QSGDGGGGFV IPAKRKIQYS SMVVVAAAGQ SRCEPGSSLN APLEPRSAQG RFLRSVLLNK RQLFHYAAAD ELKQLADDRE
101: AALARMSLSS GSDEASLHRR IAELKERYCK TAVQDIMYML IFYKYSEIRV PLVPKLSRCI YNGRLEIWPS KDWELESIYS CDTLEIIKEH VSAVIGLRVN
201: SCVTDNWATT QIQKLHLRKV YAASILYGYF LKSASLRHQL ECSLSDIHGS GYLKSPIFGC SFTTGTAQIS NKQQLRHYIS DFDPETLQRC AKPRTEEARN
301: LIEKQSLALF GTEESDETIV TSFSSLKRLV LEAVAFGTFL WDTELYVDGA YKLKENGNAE EQEGKKSI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)