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AT3G06850.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27943495 (2017): mitochondrion
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:24727099 (2014): mitochondrion
  • PMID:23444301 (2013): mitochondrion
  • PMID:23444301 (2013): mitochondrion mitochondrial matrix
  • PMID:21296373 (2011): mitochondrion
  • PMID:14764908 (2004): mitochondrion
  • PMID:14671022 (2004): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : 2-oxoacid dehydrogenases acyltransferase family protein
Curator
Summary (TAIR10)
dihydrolipoamide branched chain acyltransferase
Computational
Description (TAIR10)
BCE2; FUNCTIONS IN: acetyltransferase activity, dihydrolipoamide branched chain acyltransferase activity, alpha-ketoacid dehydrogenase activity, zinc ion binding; INVOLVED IN: response to light stimulus, response to sucrose stimulus; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089), Lipoamide Acyltransferase (InterPro:IPR015761); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT1G54220.2); Has 20964 Blast hits to 19078 proteins in 2320 species: Archae - 110; Bacteria - 11780; Metazoa - 568; Fungi - 442; Plants - 349; Viruses - 0; Other Eukaryotes - 7715 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-2625-MONOMEREC:2.3.1.168eggNOG:COG0508eggNOG:KOG0558EMBL:AC023912EMBL:AF038505EMBL:AF145451
EMBL:AK316767EMBL:AK317408EMBL:AY086441EMBL:CP002686EnsemblPlants:AT3G06850EnsemblPlants:AT3G06850.1EnsemblPlants:AT3G06850.2
entrez:819869Gene3D:3.30.559.10Gene3D:4.10.320.10GeneID:819869Genevisible:Q9M7Z1GO:GO:0004147GO:GO:0005739
GO:GO:0005759GO:GO:0006633GO:GO:0008270GO:GO:0009646GO:GO:0009744GO:GO:0016407GO:GO:0043617
GO:GO:0043754Gramene:AT3G06850.1Gramene:AT3G06850.2gramene_pathway:2.3.1.168gramene_pathway:PWY-5046hmmpanther:PTHR23151hmmpanther:PTHR23151:SF71
HOGENOM:HOG000281564InParanoid:Q9M7Z1InterPro:IPR000089InterPro:IPR001078InterPro:IPR003016InterPro:IPR004167InterPro:IPR011053
InterPro:IPR015761InterPro:IPR023213KEGG:00280+2.3.1.168KEGG:00640+2.3.1.168KEGG:ath:AT3G06850KO:K09699OMA:FVECWRG
PANTHER:PTHR23151:SF71PaxDb:Q9M7Z1Pfam:PF00198Pfam:PF00364Pfam:PF02817Pfam:Q9M7Z1Pfscan:PS50968
PhylomeDB:Q9M7Z1PIR:T52136PRIDE:Q9M7Z1PRO:PR:Q9M7Z1PROSITE:PS00189PROSITE:PS50968ProteinModelPortal:Q9M7Z1
Proteomes:UP000006548Reactome:R-ATH-70895RefSeq:NP_187341.1RefSeq:NP_850527.1scanprosite:PS00189SMR:Q9M7Z1STRING:3702.AT3G06850.1
SUPFAM:SSF47005SUPFAM:SSF51230SUPFAM:SSF52777TAIR:AT3G06850tair10-symbols:BCE2tair10-symbols:DIN3tair10-symbols:LTA1
UniGene:At.24601UniProt:Q9M7Z1
Coordinates (TAIR10) chr3:-:2158212..2160465
Molecular Weight (calculated) 52709.40 Da
IEP (calculated) 6.74
GRAVY (calculated) -0.07
Length 483 amino acids
Sequence (TAIR10)
(BLAST)
001: MIARRIWRSH RFLRPFSSSS VCSPPFRVPE YLSQSSSSPA SRPFFVHPPT LMKWGGGSRS WFSNEAMATD SNSGLIDVPL AQTGEGIAEC ELLKWFVKEG
101: DSVEEFQPLC EVQSDKATIE ITSRFKGKVA LISHSPGDII KVGETLVRLA VEDSQDSLLT TDSSEIVTLG GSKQGTENLL GALSTPAVRN LAKDLGIDIN
201: VITGTGKDGR VLKEDVLRFS DQKGFVTDSV SSEHAVIGGD SVSTKASSNF EDKTVPLRGF SRAMVKTMTM ATSVPHFHFV EEINCDSLVE LKQFFKENNT
301: DSTIKHTFLP TLIKSLSMAL TKYPFVNSCF NAESLEIILK GSHNIGVAMA TEHGLVVPNI KNVQSLSLLE ITKELSRLQH LAANNKLNPE DVTGGTITLS
401: NIGAIGGKFG SPLLNLPEVA IIALGRIEKV PKFSKEGTVY PASIMMVNIA ADHRVLDGAT VARFCCQWKE YVEKPELLML QMR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)