AT3G06500.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.523 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Plant neutral invertase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Plant neutral invertase family protein; FUNCTIONS IN: catalytic activity, beta-fructofuranosidase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: Plant neutral invertase family protein (TAIR:AT1G56560.1); Has 684 Blast hits to 681 proteins in 97 species: Archae - 0; Bacteria - 133; Metazoa - 0; Fungi - 0; Plants - 315; Viruses - 0; Other Eukaryotes - 236 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:2012309..2015471 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 74726.40 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.06 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.28 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 664 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNSRSCICVS AMKPCCRFLI SFRSSSLFGF SPPNSGKFIN SSKLHCTKID SRSIRSGIHC RRIVLDRNAF CDSDSISWGG GGSRVLRARG SSRGRGRGVL 101: VIPHVASDFR NYSTSSLDSH VNDKSFESMF VKPLVFKEVE KTEGIPKRER GNVGGGKDAN FGNVGVRKET ERCLSQTEVE KEAWKLLRGA VVNYCGFPVG 201: TVAANDPGDT QTLNYDQVFI RDFVPSAYAF MLDGEGEIVR NFLLHTLQLQ SWEKTVDCHS PGPGLMPASF KVKSAPLEGN DGSFEEFLDP DFGGSAIGRV 301: SPVDSGLWWI ILLRAYGKLT GDYTLQERID VQTGIKLILK LCLADGFDMF PTLLVTDGSC MVDRRMGIHG HPLEIQALFY SALRCAREML IVNDGTKSLV 401: TAVNNRLSAL SFHIREYYWV DIKKINEIYR YNTEEYSADA TNKFNIYPEQ IPTWLVDWIP DKGGYFIGNL QPAHMDFRFF TLGNLWAVIS SLGNQEQNEG 501: VMTLIEEKWD DLVANMPLKI CFPALEKDEW RIITGSDPKN TPWSYHNGGS WPTLLWQFTL ACIKMGKLEL AKKAVAVAEK RLKEDEWPEY YDTKSGRFVG 601: KQSRLYQTWT IAGFLAAKKL IEQPEKASLL FWEEDYQLLE TCVCGLSKSS GRKNKCSRFT PPRS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)