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AT3G05650.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.821
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : receptor like protein 32
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
receptor like protein 32 (RLP32); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 35 (TAIR:AT3G11080.1); Has 113074 Blast hits to 30005 proteins in 1111 species: Archae - 53; Bacteria - 9058; Metazoa - 26342; Fungi - 1162; Plants - 67072; Viruses - 12; Other Eukaryotes - 9375 (source: NCBI BLink).
Protein Annotations
eggNOG:COG4886eggNOG:KOG0619EMBL:AC011620EMBL:CP002686EnsemblPlants:AT3G05650EnsemblPlants:AT3G05650.1entrez:819732
Gene3D:3.80.10.10GeneID:819732GO:GO:0016021Gramene:AT3G05650.1hmmpanther:PTHR27004hmmpanther:PTHR27004:SF37HOGENOM:HOG000116562
InterPro:IPR001611InterPro:IPR003591InterPro:IPR013210InterPro:IPR032675KEGG:ath:AT3G05650OMA:TESWAINPfam:PF00560
Pfam:PF08263Pfam:PF13855PhylomeDB:Q9M9X0Proteomes:UP000006548RefSeq:NP_187216.1SMART:SM00369SMR:Q9M9X0
STRING:3702.AT3G05650.1SUPFAM:SSF52047SUPFAM:SSF52058TAIR:AT3G05650tair10-symbols:AtRLP32tair10-symbols:RLP32TMHMM:TMhelix
UniGene:At.40634UniProt:Q9M9X0
Coordinates (TAIR10) chr3:-:1645884..1648490
Molecular Weight (calculated) 97308.10 Da
IEP (calculated) 6.75
GRAVY (calculated) -0.14
Length 868 amino acids
Sequence (TAIR10)
(BLAST)
001: MKDSWNSTSI IPFTFSSLIF FLFTFDFQDV FGVPTKHLCR LEQRDALLEL KKEFKIKKPC FDGLHPTTES WANNSDCCYW DGITCNDKSG EVLELDLSRS
101: CLQSRFHSNS SLFTVLNLRF LTTLDLSYNY FSGQIPSCIE NFSHLTTLDL SKNYFSGGIP SSIGNLSQLT FLDLSGNEFV GEMPFFGNMN QLTNLYVDSN
201: DLTGIFPLSL LNLKHLSDLS LSRNQFTGTL PSNMSSLSNL EYFEAWGNAF TGTLPSSLFT IASLTSINLR NNQLNGTLEF GNISSPSTLT VLDISNNNFI
301: GPIPKSISKF INLQDLDLSH LNTQGPVDFS IFTNLKSLQL LNLSHLNTTT TIDLNALFSS HLNSIYSMDL SGNHVSATTK ISVADHHPTQ LISQLYLSGC
401: GITEFPELLR SQHKMTNLDI SNNKIKGQVP GWLWTLPKLI FVDLSNNIFT GFERSTEHGL SLITKPSMQY LVGSNNNFTG KIPSFICALR SLITLDLSDN
501: NLNGSIPPCM GNLKSTLSFL NLRQNRLGGG LPRSIFKSLR SLDVGHNQLV GKLPRSFIRL SALEVLNVEN NRINDTFPFW LSSLKKLQVL VLRSNAFHGP
601: IHHASFHTLR IINLSHNQFS GTLPANYFVN WNAMSSLMAT EDRSQEKYMG DSFRYYHDSV VLMNKGLEME LVRILKIYTA LDFSENKLEG EIPRSIGLLK
701: ELHVLNLSSN AFTGHIPSSM GNLRELESLD VSQNKLSGEI PQELGNLSYL AYMNFSHNQL GGLVPGGTQF RRQNCSSFKD NPGLYGSSLE EVCLDIHAPA
801: PQQHEPPELE EEDREVFSWI AAAIGFGPGI AFGLTIRYIL VFYKPDWFMH TFGHLQPSAH EKRLRRKQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)