AT3G05630.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : phospholipase D P2 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a member of the PXPH-PLD subfamily of phospholipase D proteins. Regulates vesicle trafficking. Required for auxin transport and distribution and hence auxin responses. This subfamily is novel structurally different from the majority of plant PLDs by having phox homology (PX) and pleckstrin homology (PH) domains. Involved regulating root development in response to nutrient limitation. Plays a major role in phosphatidic acid production during phosphate deprivation. Induced upon Pi starvation in both shoots and roots. Involved in hydrolyzing phosphatidylcholine and phosphatidylethanolamine to produce diacylglycerol for digalactosyldiacylglycerol synthesis and free Pi to sustain other Pi-requiring processes. Does not appear to be involved in root hair patterning. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
phospholipase D P2 (PLDP2); FUNCTIONS IN: phospholipase D activity; INVOLVED IN: in 7 processes; LOCATED IN: vacuole; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Phospholipase D, eukaryota (InterPro:IPR016555), Phospholipase D (InterPro:IPR015679), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: phospholipase D P1 (TAIR:AT3G16785.1); Has 2813 Blast hits to 1615 proteins in 467 species: Archae - 4; Bacteria - 808; Metazoa - 511; Fungi - 591; Plants - 736; Viruses - 0; Other Eukaryotes - 163 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:1635321..1640105 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 118817.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.63 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.38 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1046 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MSTDKLLLPN GVKSDGVIRM TRADAAAAAA SSSLGGGSQI FDELPKAAIV SVSRPDTTDF SPLLLSYTLE LQYKQFKWTL QKKASQVLYL HFALKKRLII 0101: EELHDKQEQV REWLHSLGIF DMQGSVVQDD EEPDDGALPL HYTEDSIKNR NVPSRAALPI IRPTIGRSET VVDRGRTAMQ GYLSLFLGNL DIVNSKEVCK 0201: FLEVSRLSFA REYGSKMKEG YVTVKHLRDV PGSDGVRCCL PTHCLGFFGT SWTKVWAVLK PGFLALLEDP FSGKLLDIMV FDTLGLQGTK ESSEQPRLAE 0301: QVKEHNPLRF GFKVTSGDRT VRLRTTSSRK VKEWVKAVDE AGCYSPHRFG SFAPPRGLTS DGSQAQWFVD GHTAFEAIAF AIQNATSEIF MTGWWLCPEL 0401: YLKRPFEDHP SLRLDALLET KAKQGVKIYI LLYKEVQIAL KINSLYSKKR LQNIHKNVKV LRYPDHLSSG IYLWSHHEKI VIVDYQVCFI GGLDLCFGRY 0501: DTAEHKIGDC PPYIWPGKDY YNPRESEPNS WEETMKDELD RRKYPRMPWH DVHCALWGPP CRDVARHFVQ RWNHSKRNKA PNEQTIPLLM PHHHMVLPHY 0601: LGTREIDIIA AAKPEEDPDK PVVLARHDSF SSASPPQEIP LLLPQETDAD FAGRGDLKLD SGARQDPGET SEESDLDEAV NDWWWQIGKQ SDCRCQIIRS 0701: VSQWSAGTSQ PEDSIHRAYC SLIQNAEHFI YIENQFFISG LEKEDTILNR VLEALYRRIL KAHEENKCFR VVIVIPLLPG FQGGIDDFGA ATVRALMHWQ 0801: YRTISREGTS ILDNLNALLG PKTQDYISFY GLRSYGRLFE DGPIATSQIY VHSKLMIVDD RIAVIGSSNI NDRSLLGSRD SEIGVVIEDK EFVESSMNGM 0901: KWMAGKFSYS LRCSLWSEHL GLHAGEIQKI EDPIKDATYK DLWMATAKKN TDIYNQVFSC IPNEHIRSRA ALRHNMALCK DKLGHTTIDL GIAPERLESC 1001: GSDSWEILKE TRGNLVCFPL QFMCDQEDLR PGFNESEFYT APQVFH |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)