AT3G05370.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.978 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : receptor like protein 31 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
receptor like protein 31 (RLP31); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 12 (TAIR:AT1G71400.1); Has 112233 Blast hits to 29288 proteins in 1126 species: Archae - 41; Bacteria - 6057; Metazoa - 24567; Fungi - 975; Plants - 71772; Viruses - 4; Other Eukaryotes - 8817 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:1536134..1538716 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 96873.20 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.62 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.12 | ||||||||||||||||||||||||||||||||||||||||
| Length | 860 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MMIPSQSCFC FFFMVSFFLH TLASPTLRHC RHDQRNALLE FKHEFPRVNE SNQIPYDVSL SSWNKSIDCC SWEGVTCDAI SSEVISLNLS HVPLNNSLKP 101: NSGLFKLQHL HNLTLSNCSL YGDIPSSLGN LFRLTLLDLS YNYLVGQVPP SIGNLSRLTI LDLWDNKLVG QLPASIGNLT QLEYLIFSHN KFSGNIPVTF 201: SNLTKLLVVN LYNNSFESML PLDMSGFQNL DYFNVGENSF SGTLPKSLFT IPSLRWANLE GNMFKGPIEF RNMYSPSTRL QYLFLSQNKF DGPIPDTLSQ 301: YLNLIELDLS FNNLTGSFPT FLFTIPTLER VNLEGNHLKG PVEFGNMSSS SSLKFLNFAQ NEFNGSIPES VSQYLNLEEL HLSFNNFIGT IPRSISKLAK 401: LEYFCLEDNN MVGEVPSWLW RLTMVALSNN SFNSFGESSE GLDETQVQWL DLSSNSFQGP FPHWICKLRS LEILIMSDNR FNGSIPPCLS SFMVSLTDLI 501: LRNNSLSGPL PDIFVNATKL LSLDVSRNKL DGVLPKSLIH CKAMQLLNVR SNKIKDKFPS WLGSLPSLHV LILRSNEFYG TLYQPHASIG FQSLRVIDVS 601: HNDLIGTLPS FYFSSWREMS RLTGEDGDFR LSEAPYMGKV LNATAFFVDS MEIVNKGVET EFKRINEENK VINFSGNRFS GNIPESIGLL KELRHLNLSS 701: NAFTGNIPQS LANLMKLEAL DLSLNQLSGQ IPQGLGSLSF MSTMNFSYNF LEGPVPKSTQ FQGQNCSAFM ENPKLNGLEE ICRETDRVPN PKPQESKDLS 801: EPEEHVINWI AAGIAYGPGV VCGLVIGHIF LSHKHECWFM EKFRRKKPKV VTRIARPSKH |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)