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AT3G05130.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 0.720
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31520498 (2020): mitochondrion
  • PMID:31023727 (2019): mitochondrion
  • PMID:30783145 (2019): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
BEST Arabidopsis thaliana protein match is: Prefoldin chaperone subunit family protein (TAIR:AT5G27330.1); Has 171032 Blast hits to 82560 proteins in 3364 species: Archae - 2835; Bacteria - 33550; Metazoa - 71995; Fungi - 13365; Plants - 9598; Viruses - 592; Other Eukaryotes - 39097 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IKDXeggNOG:ENOG4111BJ8EMBL:AC009177EMBL:CP002686
EnsemblPlants:AT3G05130EnsemblPlants:AT3G05130.1entrez:819675GeneID:819675
GO:GO:0016021Gramene:AT3G05130.1HOGENOM:HOG000153259KEGG:ath:AT3G05130
ncoils:CoilOMA:SSMEDANPhylomeDB:Q9MAA6Proteomes:UP000006548
RefSeq:NP_187164.1STRING:3702.AT3G05130.1TAIR:AT3G05130TMHMM:TMhelix
UniGene:At.65065UniProt:Q9MAA6
Coordinates (TAIR10) chr3:-:1433475..1435379
Molecular Weight (calculated) 73271.70 Da
IEP (calculated) 4.81
GRAVY (calculated) -0.82
Length 634 amino acids
Sequence (TAIR10)
(BLAST)
001: MAKKKASRNS NDTANDNRQQ QHDQKAPETD KKATVLSRQS SMEEHDSSEE QFQNLKSLNA MLLKQAMEKR NQIDSLVQAK DELETELARY CQEKTGLRDE
101: LDQVSDENFG LKFELDFVIV FVESQFREMC VGVDMLVKEK SDRESEIRVL KGEAIELTGK VEIEKEQLRK VCDERDLIKN GFDLQHEEVN RLKECVVRLE
201: EKESNLEIVI GKLESENERL VKERKVREEE IEGVKKEKIG LEKIMEEKKN EIDGLKREIK VLLSEKNEME IVKIEQKGVI EELERKLDKL NETVRSLTKE
301: EKVLRDLVIG LEKNLDESME KESGMMVEID ALGKERTIKE SEVERLIGEK NLIEKQMEML NVQSSDKGKL IDQLSREKVE LEERIFSRER KLVELNRKAD
401: ELTHAVAVLQ KNCDDQTKIN GKLSCKVDQL SNALAQVELR REEADKALDE EKRNGEDLKA EVLKSEKMVA KTLEELEKVK IERKSLFSAK NDLESQSESL
501: KSENVKLEKE LVELRKAMEA LKTELESAGM DAKRSMVMLK SAASMLSQLE NREDRLISEE QKREIGTEPY AMELESIEKA FKNKEDIIEE MKKEAEIMKQ
601: STEEAHKKQT FWTLVSSVTT VFAAASFAYA ARAR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)