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AT3G04430.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : NAC domain containing protein 49
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
NAC domain containing protein 49 (NAC049); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 67 (TAIR:AT4G01520.1); Has 2334 Blast hits to 2331 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2334; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JU4HeggNOG:ENOG411077VEMBL:AC022287EMBL:CP002686EnsemblPlants:AT3G04430EnsemblPlants:AT3G04430.1entrez:819598
GeneID:819598GO:GO:0003677GO:GO:0003700GO:GO:0005634GO:GO:0006351Gramene:AT3G04430.1hmmpanther:PTHR31989
hmmpanther:PTHR31989:SF5HOGENOM:HOG000153251IntAct:Q9M844InterPro:IPR003441KEGG:ath:AT3G04430OMA:IESSHTWPfam:PF02365
Pfscan:PS51005PhylomeDB:Q9M844PROSITE:PS51005Proteomes:UP000006548RefSeq:NP_187093.1SMR:Q9M844SUPFAM:SSF101941
TAIR:AT3G04430tair10-symbols:anac049tair10-symbols:NAC049UniGene:At.53181UniProt:Q9M844
Coordinates (TAIR10) chr3:-:1175506..1176986
Molecular Weight (calculated) 22507.20 Da
IEP (calculated) 5.84
GRAVY (calculated) -0.77
Length 198 amino acids
Sequence (TAIR10)
(BLAST)
001: MYRCTFNPPE EELINYYLNN KITENDDLVG KQIAEVNILH HEPADLPGLA KIESSHTWYF ISPVEKFGKL NRTKRVSRSG HWKITGNSRT IKDVDGNPIG
101: LKKFLVFQEN KRSSSSSLST TTTQQQKTNW IIHEFHSFLP HPNKMLTENK NEDYGGDYCN GLDELLQSLE QGESSGLLFG ENGHACEQDT AENSNVTM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)