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AT3G03810.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : O-fucosyltransferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
embryo sac development arrest 30 (EDA30); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, polar nucleus fusion, pollen tube development; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT3G30300.1); Has 810 Blast hits to 792 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 810; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IHGSeggNOG:ENOG410YCJ7EMBL:CP002686EnsemblPlants:AT3G03810
EnsemblPlants:AT3G03810.1entrez:821131GeneID:821131GO:GO:0005794
GO:GO:0009507GO:GO:0010197GO:GO:0016757GO:GO:0048868
Gramene:AT3G03810.1hmmpanther:PTHR31741hmmpanther:PTHR31741:SF6InParanoid:F4J2C8
InterPro:IPR019378KEGG:00514+2.4.1.221KEGG:ath:AT3G03810OMA:VHSLAMV
PaxDb:F4J2C8Pfam:PF10250PRIDE:F4J2C8ProteinModelPortal:F4J2C8
Proteomes:UP000006548RefSeq:NP_187031.2STRING:3702.AT3G03810.1TAIR:AT3G03810
tair10-symbols:EDA30TMHMM:TMhelixUniGene:At.21899UniGene:At.73135
unipathway:UPA00378UniProt:F4J2C8
Coordinates (TAIR10) chr3:-:972190..975901
Molecular Weight (calculated) 75041.80 Da
IEP (calculated) 7.76
GRAVY (calculated) -0.49
Length 656 amino acids
Sequence (TAIR10)
(BLAST)
001: MVFKSRIKWI ALFVLILSMG SLVVHLSMTK SSGVQLAYSA RDNLWQDFDS LLGAQDFRNK HLWRPVKSLE TLQPYANPRN SYPAPSSKNN GFIYAKIFGG
101: FDKIRSSICD LVTISRLLNA TLVIPELQES LRSKGISNKF KSFSYLYDEE QFIAFLKNDV IVMKTLPESL KAARKRNEFP LFKPKNSASP KFYLEDVLPK
201: LKKANVIGLI VSDGGCLQSA LPASMPELQR LRCRVAFHAL QLRPEIQVLA KEMVDRLRKS GQPFLAYHPG LVREKLAYHG CAELFQDIHS ELIQYRRAQM
301: IKQRFILEEL IVDSRLRRDN GLCPLMPEEV GILLKALGYS QKAIIYLAGS EIFGGQRVLI PLRAMFPNLV DRTSLCSTEE LSELVGPETP LPENTYKMPP
401: RKSDKQLKEE WNKAGPRPRP LPPPPDRPIY QHEKEGWYGW LTENDTEPSP SPMDLRNQAH RLLWDALDFA VSVEADVFFP GFNNDGSGWP DFSSLVMGQR
501: LYERPSSRTY RLDRKVIQEL FNITREDMYH PNRNWTLRVR KHLNSSLGES GLIRQSMLSK PRSFLSHPLP ECSCRTSALE DSRQIQSDDG RFLYGGEDEC
601: PKWIKSAGVE KSKTDDGDQP DYDHDLLAEQ SETEEEFAKS KVASAFDQDE EWDPND
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)