AT3G03520.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : non-specific phospholipase C3 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Lysophosphatidic acid phosphatase highly expressed during phosphate starvation and abiotic stresses. Role in lipid synthesis. | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
non-specific phospholipase C3 (NPC3); FUNCTIONS IN: hydrolase activity, acting on ester bonds, Lysophosphatidic acid phosphatase activity; INVOLVED IN: cellular response to phosphate starvation, phosphate metabolic process, response to abiotic stimulus; LOCATED IN: vacuole, membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoesterase (InterPro:IPR007312); BEST Arabidopsis thaliana protein match is: non-specific phospholipase C4 (TAIR:AT3G03530.1); Has 2235 Blast hits to 2112 proteins in 404 species: Archae - 32; Bacteria - 1866; Metazoa - 0; Fungi - 127; Plants - 159; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:837972..840511 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 59100.50 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.12 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.50 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 523 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVEETSSGGG SSASPIKTIV VLVQENRSFD HMLGWFKELN PEIDGVSESE PRSNPLSTSD PNSAQIFFGK ESQNIDPDPG HSFQAIYEQV FGKPFSDESP 101: YPDPKMNGFV QNAEAITKGM SEKVVMQGFP PEKLPVFKEL VQEFAVCDRW FSSLPSSTQP NRLYVHAATS NGAFSNDTNT LVRGFPQRTV FESLEESGFT 201: FGIYYQSFPN CLFYRNMRKL KYVDNFHQYH LSFKRHCKEG KLPNYVVIEP RYFKILSAPA NDDHPKNDVV EGQNLVKEIY EALRASPQWN EILFVVVYDE 301: HGGYYDHVPT PVIGVPNPDG LVGPEPYNFK FDRLGVRVPA LLISPWIEPG TVLHEPNGPE PTSQFEHSSI PATLKKIFNL KSFLTKRDEW AGTLDAVINR 401: TSPRTDCPVT LPELPRARDI DIGTQEEDED LTDFQIELIQ AAAVLKGDHI KDIYPFKLAD KMKVLDAARY VEEAFTRFHG ESKKAKEEGR DEHEIVDLSK 501: GSTRHSTPKS FVQKLFSCLI CDN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)