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AT3G03490.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
ASURE: cytosol
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : peroxin 19-1
Curator
Summary (TAIR10)
Encodes one of two PEX19 peroxin isoforms. It is predominantly cytosolic and forms dimers.
Computational
Description (TAIR10)
peroxin 19-1 (PEX19-1); CONTAINS InterPro DOMAIN/s: Pex19 protein (InterPro:IPR006708); BEST Arabidopsis thaliana protein match is: peroxin 19-2 (TAIR:AT5G17550.1); Has 637 Blast hits to 625 proteins in 250 species: Archae - 3; Bacteria - 161; Metazoa - 169; Fungi - 149; Plants - 43; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink).
Protein Annotations
BioGrid:6581eggNOG:ENOG4111QGUeggNOG:KOG3133EMBL:AC009895EMBL:AJ564199EMBL:AK175952EMBL:BT012633
EMBL:CP002686EnsemblPlants:AT3G03490EnsemblPlants:AT3G03490.1entrez:821248GeneID:821248Genevisible:Q9SRQ3GO:GO:0005778
GO:GO:0005829GO:GO:0007031GO:GO:0015031GO:GO:0042802Gramene:AT3G03490.1hmmpanther:PTHR12774HOGENOM:HOG000239321
InParanoid:Q9SRQ3IntAct:Q9SRQ3InterPro:IPR006708KEGG:ath:AT3G03490KO:K13337MINT:MINT-8381983ncoils:Coil
OMA:MANSHTDPANTHER:PTHR12774PaxDb:Q9SRQ3Pfam:PF04614Pfam:Q9SRQ3PhylomeDB:Q9SRQ3PRIDE:Q9SRQ3
PRO:PR:Q9SRQ3ProteinModelPortal:Q9SRQ3Proteomes:UP000006548Reactome:R-ATH-1369062RefSeq:NP_186999.1SMR:Q9SRQ3STRING:3702.AT3G03490.1
TAIR:AT3G03490tair10-symbols:AtPEX19-1tair10-symbols:PEX19-1UniGene:At.40972UniProt:Q9SRQ3
Coordinates (TAIR10) chr3:-:830302..831759
Molecular Weight (calculated) 28290.40 Da
IEP (calculated) 4.42
GRAVY (calculated) -0.88
Length 248 amino acids
Sequence (TAIR10)
(BLAST)
001: MANSHTDDLD ELLDSALDDF KDLNLSHQRN QREAQEEEEK KRKEETVLLP SGVQGLGMGL PDMRSKKRGK QKVSKEDHVA EALDKLREQT RETVKGLESI
101: SSKQLPASDD DGMVEDFLKQ FEDLAGSKDL ESIVETMMQQ LLSKDILHEP MKELGARYPK WLKENEASLS KEDYKRYSQQ YKLIEELNAV YENEPNNSSK
201: IMEIMQKMQE CGQPPSDIVK EIDPGFDFAS LGQISPEMLE SSPNCCIM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)