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AT3G03310.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
vacuole 0.891
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : lecithin:cholesterol acyltransferase 3
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
lecithin:cholesterol acyltransferase 3 (LCAT3); FUNCTIONS IN: phosphatidylcholine-sterol O-acyltransferase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lecithin:cholesterol acyltransferase (InterPro:IPR003386); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G19860.1); Has 560 Blast hits to 555 proteins in 155 species: Archae - 2; Bacteria - 82; Metazoa - 189; Fungi - 22; Plants - 147; Viruses - 0; Other Eukaryotes - 118 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G03310-MONOMERBioCyc:MetaCyc:AT3G03301-MONOMERBRENDA:3.1.1.32EC:3.1.1.32
eggNOG:ENOG410Y9CFeggNOG:KOG2369EMBL:AC009895EMBL:AF421148
EMBL:AY054239EMBL:AY056414EMBL:AY113174EMBL:CP002686
EnsemblPlants:AT3G03310EnsemblPlants:AT3G03310.1entrez:821286ESTHER:arath-LCAT3
Gene3D:3.40.50.1820GeneID:821286Genevisible:Q93V61GO:GO:0005783
GO:GO:0008374GO:GO:0008970GO:GO:0016042GO:GO:0031090
GO:GO:0052739GO:GO:0052740Gramene:AT3G03310.1gramene_pathway:3.1.1.32
gramene_pathway:LIPASYN-PWYhmmpanther:PTHR11440hmmpanther:PTHR11440:SF53HOGENOM:HOG000005782
InParanoid:Q93V61InterPro:IPR003386InterPro:IPR029058KEGG:ath:AT3G03310
OMA:PKTGYTEPaxDb:Q93V61Pfam:PF02450Pfam:Q93V61
PhylomeDB:Q93V61PRIDE:Q93V61PRO:PR:Q93V61ProteinModelPortal:Q93V61
Proteomes:UP000006548RefSeq:NP_566201.1SMR:Q93V61STRING:3702.AT3G03310.1
SUPFAM:SSF53474TAIR:AT3G03310tair10-symbols:ATLCAT3tair10-symbols:LCAT3
UniGene:At.25043UniProt:Q93V61
Coordinates (TAIR10) chr3:-:778767..781488
Molecular Weight (calculated) 50351.30 Da
IEP (calculated) 5.98
GRAVY (calculated) -0.18
Length 447 amino acids
Sequence (TAIR10)
(BLAST)
001: MGWIPCPCWG TNDDENAGEV ADRDPVLLVS GIGGSILHSK KKNSKSEIRV WVRIFLANLA FKQSLWSLYN PKTGYTEPLD DNIEVLVPDD DHGLYAIDIL
101: DPSWFVKLCH LTEVYHFHDM IEMLVGCGYK KGTTLFGYGY DFRQSNRIDL LILGLKKKLE TAYKRSGGRK VTIISHSMGG LMVSCFMYLH PEAFSKYVNK
201: WITIATPFQG APGCINDSIL TGVQFVEGLE SFFFVSRWTM HQLLVECPSI YEMMANPDFK WKKQPEIRVW RKKSENDVDT SVELESFGLI ESIDLFNDAL
301: KNNELSYGGN KIALPFNFAI LDWAAKTREI LNKAQLPDGV SFYNIYGVSL NTPFDVCYGT ETSPIDDLSE ICQTMPEYTY VDGDGTVPAE SAAAAQFKAV
401: ASVGVSGSHR GLLRDERVFE LIQQWLGVEP KKAKRKHLRT HKVVDSG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)