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AT3G03170.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24890.1); Has 184 Blast hits to 184 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 184; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0724eggNOG:KOG4210EMBL:BT024764EMBL:CP002686EnsemblPlants:AT3G03170EnsemblPlants:AT3G03170.1entrez:821064
GeneID:821064Gramene:AT3G03170.1hmmpanther:PTHR33172HOGENOM:HOG000126884KEGG:ath:AT3G03170OMA:QRRESPHPhylomeDB:Q29PZ2
Proteomes:UP000006548RefSeq:NP_566196.1STRING:3702.AT3G03170.1TAIR:AT3G03170UniGene:At.27928UniProt:Q29PZ2
Coordinates (TAIR10) chr3:+:732066..732729
Molecular Weight (calculated) 17267.00 Da
IEP (calculated) 9.65
GRAVY (calculated) -1.04
Length 156 amino acids
Sequence (TAIR10)
(BLAST)
001: MHYQEQMESL MLGEERRRGN YTRDVDADAD EGVNSPSSFP NSPDDSDRRS SSSSSRRGLS KHYKGKSQSF TTLAEALTVE DLAKPENPFN AKLKQRRESP
101: HCRRLSGCGG ASERNLSVHD VFLAGNDRPP RLSGNRPPPR AQTLSAAHIS ALLTRT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)