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AT3G03090.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.500
vacuole 0.500
ASURE: plasma membrane,vacuole
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:17284600 (2007): plant-type vacuole
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:17151019 (2007): plant-type vacuole
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : vacuolar glucose transporter 1
Curator
Summary (TAIR10)
Encodes a vacuolar membrane-localized glucose transporter that can also transport fructose. Mutations in these gene have effects on seed germination and time to flowering.
Computational
Description (TAIR10)
vacuolar glucose transporter 1 (VGT1); FUNCTIONS IN: carbohydrate transmembrane transporter activity, fructose transmembrane transporter activity, glucose transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: glucose transport, positive regulation of flower development, fructose transport, seed germination, response to nematode; LOCATED IN: plant-type vacuole membrane, vacuolar membrane, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G17010.3); Has 40906 Blast hits to 40365 proteins in 2435 species: Archae - 733; Bacteria - 24523; Metazoa - 4373; Fungi - 7155; Plants - 2379; Viruses - 0; Other Eukaryotes - 1743 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XNQKeggNOG:KOG0254EMBL:AC012328EMBL:AY140054
EMBL:BT010375EMBL:CP002686EnsemblPlants:AT3G03090EnsemblPlants:AT3G03090.1
entrez:821117GeneID:821117Genevisible:Q8L6Z8GO:GO:0005351
GO:GO:0005353GO:GO:0005355GO:GO:0005774GO:GO:0005887
GO:GO:0009624GO:GO:0009705GO:GO:0009845GO:GO:0009911
GO:GO:0015755GO:GO:0015758GO:GO:0015992GO:GO:0046323
GO:GO:1904659Gramene:AT3G03090.1hmmpanther:PTHR23500hmmpanther:PTHR23500:SF110
HOGENOM:HOG000202868InParanoid:Q8L6Z8InterPro:IPR003663InterPro:IPR005828
InterPro:IPR005829InterPro:IPR020846KEGG:ath:AT3G03090OMA:ATSCAIM
PaxDb:Q8L6Z8Pfam:PF00083Pfam:Q8L6Z8Pfscan:PS50850
PhylomeDB:Q8L6Z8PRIDE:Q8L6Z8PRINTS:PR00171PRO:PR:Q8L6Z8
PROSITE:PS00216PROSITE:PS50850ProteinModelPortal:Q8L6Z8Proteomes:UP000006548
RefSeq:NP_186959.2scanprosite:PS00216SMR:Q8L6Z8STRING:3702.AT3G03090.1
SUPFAM:SSF103473TAIR:AT3G03090tair10-symbols:AtVGT1tair10-symbols:VGT1
TCDB:2.A.1.1.45TIGRfam:TIGR00879TIGRFAMs:TIGR00879TMHMM:TMhelix
UniGene:At.41032UniProt:Q8L6Z8
Coordinates (TAIR10) chr3:-:700749..704579
Molecular Weight (calculated) 53545.60 Da
IEP (calculated) 7.60
GRAVY (calculated) 0.75
Length 503 amino acids
Sequence (TAIR10)
(BLAST)
001: MGFDPENQSI SSVGQVVGDS SSGGITAEKE PLLKENHSPE NYSVLAAIPP FLFPALGALL FGYEIGATSC AIMSLKSPTL SGISWYDLSS VDVGIITSGS
101: LYGALIGSIV AFSVADIIGR RKELILAAFL YLVGAIVTVV APVFSILIIG RVTYGMGIGL TMHAAPMYIA ETAPSQIRGR MISLKEFSTV LGMVGGYGIG
201: SLWITVISGW RYMYATILPF PVIMGTGMCW LPASPRWLLL RALQGQGNGE NLQQAAIRSL CRLRGSVIAD SAAEQVNEIL AELSLVGEDK EATFGELFRG
301: KCLKALTIAG GLVLFQQITG QPSVLYYAPS ILQTAGFSAA ADATRISILL GLLKLVMTGV SVIVIDRVGR RPLLLCGVSG MVISLFLLGS YYMFYKNVPA
401: VAVAALLLYV GCYQLSFGPI GWLMISEIFP LKLRGRGISL AVLVNFGANA LVTFAFSPLK ELLGAGILFC AFGVICVVSL FFIYYIVPET KGLTLEEIEA
501: KCL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)