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AT3G02690.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : nodulin MtN21 /EamA-like transporter family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); Has 18949 Blast hits to 18894 proteins in 2006 species: Archae - 336; Bacteria - 13590; Metazoa - 17; Fungi - 4; Plants - 207; Viruses - 0; Other Eukaryotes - 4795 (source: NCBI BLink).
Protein Annotations
BioGrid:6607eggNOG:COG0697eggNOG:ENOG410IEC3EMBL:AC021640
EMBL:AF428434EMBL:AY045633EMBL:AY087405EMBL:AY133570
EMBL:CP002686EnsemblPlants:AT3G02690EnsemblPlants:AT3G02690.1entrez:821274
GeneID:821274Genevisible:Q93V85GO:GO:0009507GO:GO:0016021
GO:GO:0031969Gramene:AT3G02690.1hmmpanther:PTHR22911hmmpanther:PTHR22911:SF60
HOGENOM:HOG000275238InParanoid:Q93V85IntAct:Q93V85InterPro:IPR000620
KEGG:ath:AT3G02690OMA:VATGWHMPaxDb:Q93V85Pfam:PF00892
Pfam:Q93V85PhylomeDB:Q93V85PRIDE:Q93V85PRO:PR:Q93V85
ProteinModelPortal:Q93V85Proteomes:UP000006548RefSeq:NP_566180.1STRING:3702.AT3G02690.1
SUPFAM:0043518TAIR:AT3G02690TMHMM:TMhelixUniGene:At.18824
UniGene:At.53162UniGene:At.75116UniProt:Q93V85
Coordinates (TAIR10) chr3:+:579627..581448
Molecular Weight (calculated) 44606.50 Da
IEP (calculated) 4.83
GRAVY (calculated) 0.41
Length 417 amino acids
Sequence (TAIR10)
(BLAST)
001: MEWPWSAIAA SSSSSSSCFF ASPNSCLSIT RRTNLSCVNT SVKSLRHSRF DSKHNLVKRR INGDSVVRRS TTSNNSTEET ESSSSSSSVD CVGMGSDVEC
101: VNNGEDEENR SSGILSGGEG TFLEWTVLIS PFFFWGTAMV AMKEVLPITG PFFVAAFRLI PAGLLLVAFA VYKGRPLPEG INAWFSIALF ALVDATCFQG
201: FLAQGLQRTS AGLGSVIIDS QPLTVAVLAS FLFGESIGIV RAGGLLLGVA GLLLLEVPSV TSDGNNFSLW GSGEWWMLLA AQSMAIGTVM VRWVSKYSDP
301: IMATGWHMVI GGLPLLAISV INHDPVFNGS LQDLSTNDVI ALLYTSIFGS AVSYGVYFYS ATKGSLTKLS SLTFLTPMFA SIFGYLYLNE TFSSLQLVGA
401: AVTLVAIYLV NFPEGND
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)