AT3G02670.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.997 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Glycine-rich protein family | ||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Glycine-rich protein family; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: embryo; EXPRESSED DURING: C globular stage; Has 51820 Blast hits to 16186 proteins in 847 species: Archae - 9; Bacteria - 3831; Metazoa - 39595; Fungi - 2015; Plants - 2474; Viruses - 707; Other Eukaryotes - 3189 (source: NCBI BLink). | ||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:573949..574602 | ||||||||||||||||
| Molecular Weight (calculated) | 22099.90 Da | ||||||||||||||||
| IEP (calculated) | 11.16 | ||||||||||||||||
| GRAVY (calculated) | 0.14 | ||||||||||||||||
| Length | 217 amino acids | ||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASLATTLAL ILFLIFHLTP ETTVARPLND ADAKPVDRVV TTTTNEANNL AFVSDPFSSL QSSPPTSPIP GSPGFRLPFP FPSSPGGNPG IPGSPGFRLP 101: FPFPSSPGGN PGIPGIPGIP GLPGIPGSPG FRLPFPFPSS PGGGSIPGIP GSPGFRLPFP FPPSGGGIPG LPLPFPPLPP VTIPGLPLPF PPLPPVTIPS 201: FPGFRFPPLP FLPPSTQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)