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AT3G02280.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.929
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Flavodoxin family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Flavodoxin family protein; FUNCTIONS IN: oxidoreductase activity, FMN binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), FAD-binding, type 1 (InterPro:IPR003097), Flavodoxin/nitric oxide synthase (InterPro:IPR008254), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709); BEST Arabidopsis thaliana protein match is: P450 reductase 1 (TAIR:AT4G24520.1); Has 7053 Blast hits to 6598 proteins in 1587 species: Archae - 9; Bacteria - 3832; Metazoa - 1042; Fungi - 865; Plants - 492; Viruses - 0; Other Eukaryotes - 813 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G02280-MONOMERBioGrid:5751EC:1.18.1.-eggNOG:COG0369eggNOG:KOG1159EMBL:AC009755EMBL:AK229452
EMBL:BT010739EMBL:CP002686EnsemblPlants:AT3G02280EnsemblPlants:AT3G02280.1entrez:820417Gene3D:1.20.990.10Gene3D:3.40.50.360
GeneID:820417Genevisible:Q6NPS8GO:GO:0003958GO:GO:0005506GO:GO:0005634GO:GO:0005737GO:GO:0009793
GO:GO:0010181GO:GO:0016226GO:GO:0016651GO:GO:0050660GO:GO:0050661Gramene:AT3G02280.1HAMAP:MF_03178
hmmpanther:PTHR19384hmmpanther:PTHR19384:SF10HOGENOM:HOG000173033InParanoid:Q6NPS8InterPro:IPR001094InterPro:IPR001433InterPro:IPR001709
InterPro:IPR003097InterPro:IPR008254InterPro:IPR017927InterPro:IPR017938InterPro:IPR023173InterPro:IPR028879InterPro:IPR029039
iPTMnet:Q6NPS8KEGG:ath:AT3G02280OMA:AIPPDYLPaxDb:Q6NPS8Pfam:PF00175Pfam:PF00258Pfam:PF00667
Pfam:Q6NPS8Pfscan:PS50902Pfscan:PS51384PhylomeDB:Q6NPS8PRIDE:Q6NPS8PRINTS:PR00369PRINTS:PR00371
PRO:PR:Q6NPS8PROSITE:PS50902PROSITE:PS51384ProteinModelPortal:Q6NPS8Proteomes:UP000006548RefSeq:NP_186877.2SMR:Q6NPS8
STRING:3702.AT3G02280.1SUPFAM:SSF52218SUPFAM:SSF52343SUPFAM:SSF63380TAIR:AT3G02280UniGene:At.27987UniProt:Q6NPS8
Coordinates (TAIR10) chr3:+:453646..457659
Molecular Weight (calculated) 70415.70 Da
IEP (calculated) 6.74
GRAVY (calculated) -0.38
Length 623 amino acids
Sequence (TAIR10)
(BLAST)
001: MGEKQRKLLV LYASQTGNAL DAAERIGREA ERRGLPASVV STDEFDTSSL PHHEEAVVFV VSTTGQGDSP DSFKAFWRFL LQRNLGNYWL QQVRYAVFGL
101: GDSGYQKYNF VAKKLDKRLS DLGATTIIEK GLGDDQHPSG YEGTLDPWML SLWRTLYQIN PKYFPKGPDV KIPQDEVIDK PKYRILFHKQ EKLEPKLLSD
201: SDIIQRARGM SPGKLFKDKS KPDCFLKMTR NEVLTKAEST KDVRHFEFQF VSSTIEYEVG DVVELLPSQN SSVVDAFIER CGLDPESFIT VGPRETENSS
301: FSEEMITQIP IKLKTFVELT MDVTSASPRR YFFEIMSFYA TAEHEKERLQ YFASPEGRDD LYNYNQKERR SILEVLEDFP SVQIPFDWLV QLVPPLKPRA
401: FSISSSPLAH PAAVHLTVSI VSWITPYKRT RKGLCSSWLA SLAPEQEVNI PVWFHKGSLP APSQSLPLIL VGPGTGCAPF RGFIAERAVQ AQSSPVAPVM
501: FFFGCRNKDT DFLYRDFWES HAREGGMLSE GKGGGFYTAF SRDQPKKVYV QHKIREMSKR VWDLLCDGAA VYVAGSSTKM PCDVMSAFED IVSEETGGGS
601: KEVASRWLKA LEKTGRYNVE AWS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)