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AT3G02140.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : AFP2 (ABI five-binding protein 2) family protein
Curator
Summary (TAIR10)
Encodes a protein that acts in the nucleus and is an important negative regulator of ABA and salt stress responses, and could play a critical role in controlling root elongation, floral initiation and starch degradation.
Computational
Description (TAIR10)
TWO OR MORE ABRES-CONTAINING GENE 2 (TMAC2); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1675 (InterPro:IPR012463); BEST Arabidopsis thaliana protein match is: ABI five binding protein 3 (TAIR:AT3G29575.4); Has 163 Blast hits to 161 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 163; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioGrid:6515eggNOG:ENOG410JUF8eggNOG:ENOG41106XPEMBL:AC009755EMBL:AC011664EMBL:AY034949EMBL:AY062992
EMBL:CP002686EnsemblPlants:AT3G02140EnsemblPlants:AT3G02140.1entrez:821182GeneID:821182Genevisible:Q9S7Z2GO:GO:0005634
GO:GO:0007165GO:GO:0009651GO:GO:0009737GO:GO:0009788GO:GO:0010581Gramene:AT3G02140.1hmmpanther:PTHR31413
hmmpanther:PTHR31413:SF4HOGENOM:HOG000239856InParanoid:Q9S7Z2IntAct:Q9S7Z2InterPro:IPR012463InterPro:IPR031307InterPro:IPR032308
KEGG:ath:AT3G02140ncoils:CoilOMA:RAFLEFKPANTHER:PTHR31413PaxDb:Q9S7Z2Pfam:PF07897Pfam:PF16135
Pfam:Q9S7Z2PhylomeDB:Q9S7Z2PRIDE:Q9S7Z2PRO:PR:Q9S7Z2Proteomes:UP000006548RefSeq:NP_566163.1STRING:3702.AT3G02140.1
TAIR:AT3G02140tair10-symbols:AFP4tair10-symbols:TMAC2UniGene:At.18540UniProt:Q9S7Z2
Coordinates (TAIR10) chr3:-:385478..386437
Molecular Weight (calculated) 35457.00 Da
IEP (calculated) 8.62
GRAVY (calculated) -0.81
Length 319 amino acids
Sequence (TAIR10)
(BLAST)
001: MEMIRGRGIP NGVVQVPNLS ANNLLQKFFI ASNHFCQRDS EHGENQQEAK KREDEAEEDE KDVELTLGLS LNGQFGTDPR SRKRRHFELG RSSSIPEGFV
101: FDEQRSGGGN GGDMRRIVGR GGSDMFQLDR TRSLPVVTEM DIEKERKVSE KTRAFMESPV TNRGAYLTKD KNRGQAVETE KPRAFLEFKI PPTKEGKKEK
201: DRLVVTGPVN GKGKNGNTAK KQKNNVENSG MEKARNILED MPCVSTRDVG ADGKRVEGFL YWYGGNKEEV KIVCVCHGSF LSPAEFVRHG GGTVSDDDGG
301: DVMINPLRHI VVKLPSSSI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)