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AT3G02130.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.998
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28003327 (2017): extracellular region apoplast
  • PMID:19334764 (2009): plasma membrane
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : receptor-like protein kinase 2
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
receptor-like protein kinase 2 (RPK2); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: lignin metabolic process, protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, pollen maturation, anther dehiscence; LOCATED IN: plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: receptor-like protein kinase 1 (TAIR:AT1G69270.1); Has 212351 Blast hits to 140653 proteins in 4689 species: Archae - 161; Bacteria - 19257; Metazoa - 62611; Fungi - 11388; Plants - 92974; Viruses - 608; Other Eukaryotes - 25352 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G02130-MONOMERBioGrid:6573EC:2.7.11.1eggNOG:COG0515eggNOG:COG4886eggNOG:ENOG410IHEJEMBL:AC009755
EMBL:AC011664EMBL:AK117442EMBL:CP002686EMBL:FJ708715EnsemblPlants:AT3G02130EnsemblPlants:AT3G02130.1entrez:821240
Gene3D:2.60.120.200Gene3D:3.80.10.10GeneID:821240Genevisible:Q9S7I6GO:GO:0004674GO:GO:0005524GO:GO:0005886
GO:GO:0009409GO:GO:0009414GO:GO:0009846GO:GO:0009942GO:GO:0009945GO:GO:0016021GO:GO:0048508
GO:GO:0048653Gramene:AT3G02130.1hmmpanther:PTHR27000hmmpanther:PTHR27000:SF205HOGENOM:HOG000116551InParanoid:Q9S7I6InterPro:IPR000719
InterPro:IPR001611InterPro:IPR003591InterPro:IPR008271InterPro:IPR011009InterPro:IPR013210InterPro:IPR013320InterPro:IPR017441
InterPro:IPR032675KEGG:ath:AT3G02130OMA:NIVQWSCPaxDb:Q9S7I6Pfam:PF00069Pfam:PF00560Pfam:PF08263
Pfam:PF13855Pfam:Q9S7I6Pfscan:PS50011PhylomeDB:Q9S7I6PRIDE:Q9S7I6PRO:PR:Q9S7I6PROSITE:PS00107
PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:Q9S7I6Proteomes:UP000006548RefSeq:NP_186862.3scanprosite:PS00107scanprosite:PS00108
SMART:SM00220SMART:SM00369SMR:Q9S7I6STRING:3702.AT3G02130.1SUPFAM:SSF52047SUPFAM:SSF52058SUPFAM:SSF56112
TAIR:AT3G02130tair10-symbols:CLI1tair10-symbols:RPK2tair10-symbols:TOAD2TMHMM:TMhelixUniGene:At.41177UniProt:Q9S7I6
Coordinates (TAIR10) chr3:+:380726..384181
Molecular Weight (calculated) 125237.00 Da
IEP (calculated) 6.89
GRAVY (calculated) 0.02
Length 1151 amino acids
Sequence (TAIR10)
(BLAST)
0001: MTSLPSSVIK WRFFRRQMPS DVVFSLCLLC FASCLAGKIT VLADSDKSVL LRFKKTVSDP GSILASWVEE SEDYCSWFGV SCDSSSRVMA LNISGSGSSE
0101: ISRNRFTCGD IGKFPLYGFG VRRDCTGNHG ALAGNLPSVI MSLTGLRVLS LPFNSFSGEI PVGIWGMEKL EVLDLEGNLM TGSLPDQFTG LRNLRVMNLG
0201: FNRVSGEIPN SLQNLTKLEI LNLGGNKLNG TVPGFVGRFR VLHLPLNWLQ GSLPKDIGDS CGKLEHLDLS GNFLTGRIPE SLGKCAGLRS LLLYMNTLEE
0301: TIPLEFGSLQ KLEVLDVSRN TLSGPLPVEL GNCSSLSVLV LSNLYNVYED INSVRGEADL PPGADLTSMT EDFNFYQGGI PEEITRLPKL KILWVPRATL
0401: EGRFPGDWGS CQNLEMVNLG QNFFKGEIPV GLSKCKNLRL LDLSSNRLTG ELLKEISVPC MSVFDVGGNS LSGVIPDFLN NTTSHCPPVV YFDRFSIESY
0501: SDPSSVYLSF FTEKAQVGTS LIDLGSDGGP AVFHNFADNN FTGTLKSIPL AQERLGKRVS YIFSAGGNRL YGQFPGNLFD NCDELKAVYV NVSFNKLSGR
0601: IPQGLNNMCT SLKILDASVN QIFGPIPTSL GDLASLVALN LSWNQLQGQI PGSLGKKMAA LTYLSIANNN LTGQIPQSFG QLHSLDVLDL SSNHLSGGIP
0701: HDFVNLKNLT VLLLNNNNLS GPIPSGFATF AVFNVSSNNL SGPVPSTNGL TKCSTVSGNP YLRPCHVFSL TTPSSDSRDS TGDSITQDYA SSPVENAPSQ
0801: SPGKGGFNSL EIASIASASA IVSVLIALVI LFFYTRKWHP KSKIMATTKR EVTMFMDIGV PITFDNVVRA TGNFNASNLI GNGGFGATYK AEISQDVVVA
0901: IKRLSIGRFQ GVQQFHAEIK TLGRLRHPNL VTLIGYHASE TEMFLVYNYL PGGNLEKFIQ ERSTRDWRVL HKIALDIARA LAYLHDQCVP RVLHRDVKPS
1001: NILLDDDCNA YLSDFGLARL LGTSETHATT GVAGTFGYVA PEYAMTCRVS DKADVYSYGV VLLELLSDKK ALDPSFVSYG NGFNIVQWAC MLLRQGRAKE
1101: FFTAGLWDAG PHDDLVEVLH LAVVCTVDSL STRPTMKQVV RRLKQLQPPS C
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)