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AT3G01970.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : WRKY DNA-binding protein 45
Curator
Summary (TAIR10)
member of WRKY Transcription Factor; Group I
Computational
Description (TAIR10)
WRKY DNA-binding protein 45 (WRKY45); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 75 (TAIR:AT5G13080.1); Has 3497 Blast hits to 3049 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3482; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JSDVeggNOG:ENOG41108WCEMBL:AC010797EMBL:AC011664EMBL:AF426251EMBL:AK118457EMBL:AY085246
EMBL:CP002686EMBL:U63815EnsemblPlants:AT3G01970EnsemblPlants:AT3G01970.1entrez:821270ExpressionAtlas:Q9S763Gene3D:2.20.25.80
GeneID:821270Genevisible:Q9S763GO:GO:0003700GO:GO:0005634GO:GO:0006351GO:GO:0006817GO:GO:0008134
GO:GO:0043565GO:GO:0044212Gramene:AT3G01970.1hmmpanther:PTHR31221hmmpanther:PTHR31221:SF25HOGENOM:HOG000237589InParanoid:Q9S763
InterPro:IPR003657KEGG:ath:AT3G01970OMA:MHIFPPFPaxDb:Q9S763Pfam:PF03106Pfam:Q9S763Pfscan:PS50811
PhylomeDB:Q9S763PRO:PR:Q9S763PROSITE:PS50811ProteinModelPortal:Q9S763Proteomes:UP000006548RefSeq:NP_186846.1SMART:SM00774
SMR:Q29Q72SMR:Q9S763STRING:3702.AT3G01970.1SUPFAM:0050605SUPFAM:SSF118290TAIR:AT3G01970tair10-symbols:ATWRKY45
tair10-symbols:WRKY45UniGene:At.26598UniGene:At.49597UniGene:At.67563UniProt:Q29Q72UniProt:Q9S763
Coordinates (TAIR10) chr3:-:326614..327159
Molecular Weight (calculated) 17226.20 Da
IEP (calculated) 9.21
GRAVY (calculated) -1.07
Length 147 amino acids
Sequence (TAIR10)
(BLAST)
001: MEDRRCDVLF PCSSSVDPRL TEFHGVDNSA QPTTSSEEKP RSKKKKKERE ARYAFQTRSQ VDILDDGYRW RKYGQKAVKN NPFPRSYYKC TEEGCRVKKQ
101: VQRQWGDEGV VVTTYQGVHT HAVDKPSDNF HHILTQMHIF PPFCLKE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)