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AT3G01960.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 13 Blast hits to 13 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
DNASU:821109eggNOG:ENOG410JUX4eggNOG:ENOG41106G3EMBL:AC010797EMBL:AC011664EMBL:BT029337EMBL:CP002686
EnsemblPlants:AT3G01960EnsemblPlants:AT3G01960.1entrez:821109GeneID:821109Gramene:AT3G01960.1hmmpanther:PTHR36030hmmpanther:PTHR36030:SF1
HOGENOM:HOG000272724KEGG:ath:AT3G01960OMA:NNVHYTSPhylomeDB:Q9S839Proteomes:UP000006548RefSeq:NP_186845.1TAIR:AT3G01960
UniGene:At.50986UniProt:Q9S839
Coordinates (TAIR10) chr3:-:324581..325087
Molecular Weight (calculated) 15567.60 Da
IEP (calculated) 8.80
GRAVY (calculated) -0.54
Length 138 amino acids
Sequence (TAIR10)
(BLAST)
001: MEMNRRRSRG FMIAKLMPFC KAVKSPTPSQ DLYNNVHYTS STTTSYARQP DFNNYVTATT PLPPKVSFLL QPSLAPEGKD MEKKLNMMAE KLIGRGINGV
101: DDCVDARAAS YISSVRERFK ADQYCEKLTT VISLDDEN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)