suba logo
AT3G01910.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
peroxisome 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31871212 (2020): mitochondrion
  • PMID:31520498 (2020): mitochondrion
  • PMID:31186290 (2019): cytosol None
  • PMID:31023727 (2019): mitochondrion
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:24134884 (2013): cytoskeleton microtubules
  • PMID:24130194 (2013): peroxisome
  • PMID:23750852 (2013): mitochondrion
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22550958 (2012): plastid
  • PMID:21311031 (2011): mitochondrion
  • PMID:19329564 (2009): peroxisome
  • PMID:18931141 (2008): peroxisome
  • PMID:17951448 (2007): peroxisome
  • PMID:14671022 (2004): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : sulfite oxidase
Curator
Summary (TAIR10)
Encodes a homodimeric Mo-enzyme with molybdopterin as organic component of the molybdenum cofactor. It lacks the heme domain that other eukaryotic Mo-enzymes possess and has no redox-active centers other than the molybdenum. SO protein has been found in all parts of the plant. The plant SO combines its enzymatic sulfite oxidation with a subsequent nonenzymatic step using its reaction product H2O2 as intermediate for oxidizing another molecule of sulfite.
Computational
Description (TAIR10)
sulfite oxidase (SOX); FUNCTIONS IN: sulfite oxidase activity; INVOLVED IN: sulfur metabolic process, response to sulfur dioxide, chlorophyll metabolic process; LOCATED IN: mitochondrion, peroxisome; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), Eukaryotic molybdopterin oxidoreductase (InterPro:IPR008335), Moybdenum cofactor oxidoreductase, dimerisation (InterPro:IPR005066), Oxidoreductase, molybdopterin-binding domain (InterPro:IPR000572); BEST Arabidopsis thaliana protein match is: nitrate reductase 1 (TAIR:AT1G77760.1); Has 4198 Blast hits to 4195 proteins in 919 species: Archae - 144; Bacteria - 2268; Metazoa - 143; Fungi - 280; Plants - 245; Viruses - 0; Other Eukaryotes - 1118 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-2438-MONOMERBioCyc:ARA:GQT-301-MONOMERBioGrid:5452BRENDA:1.8.3.1
EC:1.8.3.1eggNOG:COG2041eggNOG:KOG0535EMBL:AB071965
EMBL:AC010797EMBL:AC011664EMBL:AF200972EMBL:AF360247
EMBL:AY133863EMBL:CP002686EnsemblPlants:AT3G01910EnsemblPlants:AT3G01910.1
entrez:820118EvolutionaryTrace:Q9S850ExpressionAtlas:Q9S850Gene3D:2.60.40.650
Gene3D:3.90.420.10GeneID:820118Genevisible:Q9S850GO:GO:0005739
GO:GO:0005777GO:GO:0006790GO:GO:0008482GO:GO:0010477
GO:GO:0015994GO:GO:0030151GO:GO:0042128hmmpanther:PTHR19372
hmmpanther:PTHR19372:SF8HOGENOM:HOG000252609InParanoid:Q9S850IntAct:Q9S850
InterPro:IPR000572InterPro:IPR005066InterPro:IPR008335InterPro:IPR014756
OMA:PVDLFYKPaxDb:Q9S850PDB:1OGPPDBsum:1OGP
Pfam:PF00174Pfam:PF03404Pfam:Q9S850PhylomeDB:Q9S850
PRIDE:Q9S850PRINTS:PR00407PRO:PR:Q9S850ProteinModelPortal:Q9S850
Proteomes:UP000006548Reactome:R-ATH-1614517RefSeq:NP_186840.1SMR:Q9S850
STRING:3702.AT3G01910.1SUPFAM:SSF56524SUPFAM:SSF81296TAIR:AT3G01910
tair10-symbols:AT-SOtair10-symbols:AtSOtair10-symbols:SOXUniGene:At.24506
UniGene:At.48610UniPathway:UPA00096UniProt:Q0WWA1UniProt:Q9S850
Coordinates (TAIR10) chr3:-:314919..317274
Molecular Weight (calculated) 43331.60 Da
IEP (calculated) 8.99
GRAVY (calculated) -0.32
Length 393 amino acids
Sequence (TAIR10)
(BLAST)
001: MPGIRGPSEY SQEPPRHPSL KVNAKEPFNA EPPRSALVSS YVTPVDLFYK RNHGPIPIVD HLQSYSVTLT GLIQNPRKLF IKDIRSLPKY NVTATLQCAG
101: NRRTAMSKVR NVRGVGWDVS AIGNAVWGGA KLADVLELVG IPKLTASTNL GARHVEFVSV DRCKEENGGP YKASITLSQA TNPEADVLLA YEMNGETLNR
201: DHGFPLRVVV PGVIGARSVK WLDSINVIAE ESQGFFMQKD YKMFPPSVNW DNINWSSRRP QMDFPVQSAI CSVEDVQMVK PGKVSIKGYA VSGGGRGIER
301: VDISLDGGKN WVEASRTQEP GKQYISEHSS SDKWAWVLFE ATIDVSQTTE VIAKAVDSAA NVQPENVESV WNLRGVLNTS WHRVLLRLGH SNL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)